Pairwise Alignments

Query, 372 a.a., tRNA-specific 2-thiouridylase MnmA (RefSeq) from Shewanella sp. ANA-3

Subject, 368 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase from Herbaspirillum seropedicae SmR1

 Score =  397 bits (1021), Expect = e-115
 Identities = 200/362 (55%), Positives = 258/362 (71%), Gaps = 8/362 (2%)

Query: 11  KKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKL 70
           K+V++GMSGGVDSSVSA+LL +QGY+V GLFMKNWE+DD+ EYC+  ED  DA +V D +
Sbjct: 4   KRVVIGMSGGVDSSVSAWLLKEQGYEVIGLFMKNWEDDDDSEYCSTREDWIDAVSVADVV 63

Query: 71  GIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLDFADDILDADYIA 130
           G+ +  VNFA+EY D VF  FL EY+AGRTPNPD++CN EIKFKAFLD A   L AD IA
Sbjct: 64  GVDIEAVNFASEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMK-LGADLIA 122

Query: 131 MGHYVRRRDNADGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAKK 190
            GHY R R    G  Q+L+ +D +KDQSYFL+ L+ EQ++R++FP+GE+ K EVR IA++
Sbjct: 123 TGHYARVRQGPQGDFQLLKALDASKDQSYFLHRLNQEQLSRTVFPLGEIHKTEVRRIAEQ 182

Query: 191 MGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETAEGEIIGKHQGLMYQTLGQRK 250
           + L    KKDSTGICFIGER F EFL  YL  +PG I+TA+G+ +G+H GL + TLGQRK
Sbjct: 183 LQLPNAKKKDSTGICFIGERPFREFLNRYLSYKPGPIKTADGQTVGEHVGLSFYTLGQRK 242

Query: 251 GLGIGGMK-----NSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDRKG 305
           G+GIGG+K     + + D WYV  KD++ N L + QG  HP L+S  +   Q+ WV    
Sbjct: 243 GIGIGGLKAHQNADGHGDAWYVARKDVENNTLYIVQGHDHPWLLSPTLSAGQVSWVAGHA 302

Query: 306 PAEGSQIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVCLGGGI 365
           P + + +  KTRYRQ D+PC  +     +  + FD P  AVTPGQSAV YDG+VCLGGGI
Sbjct: 303 P-QMAALSAKTRYRQADVPCGFSDA-GASFSLAFDTPQWAVTPGQSAVLYDGDVCLGGGI 360

Query: 366 ID 367
           I+
Sbjct: 361 IE 362