Pairwise Alignments

Query, 640 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 646 a.a., Acetate--CoA ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  456 bits (1174), Expect = e-132
 Identities = 259/621 (41%), Positives = 368/621 (59%), Gaps = 20/621 (3%)

Query: 13  LHQTSIANKQAFWQQAAKALDWVTPSKQILDESEAPF---YHWFSDGELNTCYNAVDRHV 69
           L+++SIA+  AFW +  K +DW+ P   + D S  P      WF DG LN   N +DRH 
Sbjct: 27  LYKSSIADPDAFWAEHGKRIDWIKPFTAVKDVSFDPHDVHIRWFHDGTLNVSVNCLDRH- 85

Query: 70  LAGRGEQIAIHYVSPVTETEYSITYRELQAQVARLAGYLQSVGVAKGDRVVIYMPMVPET 129
           L  RG+Q AI +     + +  ITYR+L  +V +LA   + +GV KGDRV IY+PM+PE 
Sbjct: 86  LETRGDQTAILWEGDDPKDDARITYRDLYERVCKLANAFRELGVKKGDRVCIYLPMIPEA 145

Query: 130 AYAMLACARIGAIHSVVFGGFAANELATRINDAKPKLVMSASCGIEPSGVVPYKPLLDKA 189
           A AMLACARIGA+HS+VFGGF+ + LA RI D++  LV+++  G+     V  K  +D A
Sbjct: 146 AVAMLACARIGAVHSIVFGGFSPDSLANRIQDSECTLVITSDEGLRGGRKVALKKNVDTA 205

Query: 190 LNEAVHKVEHCLILNRPQYEAQMQAGRDKDWQTALCTSDSADC--VTVKATDPLYVLYTS 247
           L E    V+  +++ R         GRD  W   +  +  A+C    + A DPL++LYTS
Sbjct: 206 L-EHCPSVKTVVVVKRTGGAIDTVEGRDV-WYHEITANQPAECQPEEMNAEDPLFILYTS 263

Query: 248 GTTGQPKGVVRDNGGHAVALAWSMANIYDIAQGDVFWAASDVGWVVGHSYIVYGPLLVGA 307
           G+TG+PKGV+  +GG+ V ++ +   ++D   G+V+W  +DVGWV GHSYIVYGPL  GA
Sbjct: 264 GSTGKPKGVLHTSGGYLVYVSMTHEYVFDYKDGEVYWCTADVGWVTGHSYIVYGPLANGA 323

Query: 308 TTLLYEGKPVGTPDPGAFWRTIAKYRVKSFFTAPTAIRAIKREDPDGEFILGVDLSCLKN 367
            +L++EG P   PD   FW+ + K++V  F+TAPTAIRA+ RE    E +   D S L+ 
Sbjct: 324 ISLMFEGVP-NYPDVSRFWQVVEKHKVNIFYTAPTAIRALMREGE--EPVKKHDRSSLRI 380

Query: 368 VFLAGERCDPDTLHWAEAKLHK---PVIDHWWQTETGWPVAANLMGVAPIAVKAGSPGRP 424
           +   GE  +P+   W    + +   P++D WWQTETG  +   L G   +  K GS   P
Sbjct: 381 LGSVGEPINPEAWTWYHRVVGEDRCPIVDTWWQTETGGILITPLPGATKL--KPGSATLP 438

Query: 425 VPGYEVDVVDELGAKVAANVSGNVVIKLPLPPGTLTTLWQNNKRYQDSYLSMYPGYYLTG 484
             G E  +VD  G +++    GN+ I     PG + T++ +++R+  +Y S Y GYY TG
Sbjct: 439 FFGVEPVLVDAEGNELSGATEGNLCIARSW-PGQMRTVYGDHERFVQTYFSTYKGYYFTG 497

Query: 485 DAGYMDEDGYLYIMSRIDDIINVAGHRLSTGRFEEVLCQHPDVAEAAVIGVDDKLKGQVP 544
           D    DEDGY +I  R+DD+INV+GHR+ T   E  L  HP VAEAAV+G    +KGQ  
Sbjct: 498 DGCRRDEDGYYWITGRVDDVINVSGHRMGTAEIESALVAHPKVAEAAVVGFPHDIKGQGI 557

Query: 545 LGLVVLKKGVTITDEELHKQLIALVRQEIGPVASFRLVSAIQKLPKTRSGKILRGTMRKI 604
              V L  G   TD  L K+L+A VR++IGP+AS  ++     LPKTRSGKI+R  +RKI
Sbjct: 558 YAYVTLVAGEKETD-ALRKELVAWVRKDIGPIASPDIIQWAPGLPKTRSGKIMRRILRKI 616

Query: 605 ADNQ--QYTAPATIEDPQTLD 623
           A+N+       +T+ DP  ++
Sbjct: 617 AENEFGALGDTSTLADPTVVE 637