Pairwise Alignments

Query, 607 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 610 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1140 bits (2950), Expect = 0.0
 Identities = 556/610 (91%), Positives = 588/610 (96%), Gaps = 3/610 (0%)

Query: 1   MKSKLDKALSLVALGVLGVLHSAHAAPVYEIVNLDNYDLQ--GTLEGTRNGYALGVNAND 58
           MKSKLDKALSLVALGVLGVLHSAHAAPVYEIVN++NYDLQ  GTLEGTRNGYALG+NAND
Sbjct: 1   MKSKLDKALSLVALGVLGVLHSAHAAPVYEIVNIENYDLQRTGTLEGTRNGYALGINAND 60

Query: 59  ELVGIAKGKKKLSTSDVEGGVIDVEDGIAPEETITYSITAAIVANNFAFVAAQNGAAGAW 118
           ELVGIAKGKKKLSTSDVEGGVIDVEDGIAPEETITYSITAAIVANNFAF+AAQNGAAGAW
Sbjct: 61  ELVGIAKGKKKLSTSDVEGGVIDVEDGIAPEETITYSITAAIVANNFAFIAAQNGAAGAW 120

Query: 119 LPTFDSINGTTAPSDISVVNSVDTFYYGINDAGVKVGSMTAPEKKTENT-TTDDTTDYWY 177
           LPTFDSINGTT PSD SVVNSVDTFYY INDAG+KVGSMTAPEKKTENT TTD+TTDYWY
Sbjct: 121 LPTFDSINGTTPPSDTSVVNSVDTFYYDINDAGLKVGSMTAPEKKTENTATTDNTTDYWY 180

Query: 178 YRDYEYRGVAKVGDSEIPLPPPYTQYVKDDKTVELGGWSAATAVNNNNLVVGYASTDISK 237
           YRDYEYRGVAKVG +EIPLPPPYTQYVKDDKTV+LGGWSAATAVNNNNLVVGYASTDISK
Sbjct: 181 YRDYEYRGVAKVGGTEIPLPPPYTQYVKDDKTVQLGGWSAATAVNNNNLVVGYASTDISK 240

Query: 238 YGGDRVAYCLGTDNTLPLDVCIQREQYPNTQGTRNIQYQTRAYVWQLDNGVATGTALPLG 297
           YG DRVAYCL TDNTLPLDVCIQREQYPN QGTRNIQYQTRA++WQLDNG A+GTALPLG
Sbjct: 241 YGADRVAYCLSTDNTLPLDVCIQREQYPNDQGTRNIQYQTRAFIWQLDNGNASGTALPLG 300

Query: 298 LTPASDNSLTFTAQALGVNNEGVVAGRSHVYRNGNTDRLRQDAAYWSKDAEGNYQYHWIP 357
           LTPASDN+LTFTAQA+GVNN+GVVAGRSHVYR G+T RL QDAAYWSK+AEGNYQYHWIP
Sbjct: 301 LTPASDNTLTFTAQAMGVNNDGVVAGRSHVYRYGDTGRLHQDAAYWSKNAEGNYQYHWIP 360

Query: 358 MGDSISSSIAYDVNDSGILVGSYRSYIQGYLRDKFFYFDTNTPEVAYVTPNDFASTTTDL 417
           M D++SSSIAYDVND+GI+VGSYRSYI GYLRDKFFYFD NTP+V YVTPNDFA+TTTDL
Sbjct: 361 MADAVSSSIAYDVNDNGIVVGSYRSYISGYLRDKFFYFDINTPDVPYVTPNDFATTTTDL 420

Query: 418 SSKPKDINNKGQVVGYIETTYDKEKPRPKAGFLYEKSTGEFSNLNNLLTCESKGFEKGSD 477
           SSKPKDINNKGQVVGYIETTYDKEKPRPKAGFLYEKSTGEFSNLN LLTCESKGFEKG+D
Sbjct: 421 SSKPKDINNKGQVVGYIETTYDKEKPRPKAGFLYEKSTGEFSNLNTLLTCESKGFEKGAD 480

Query: 478 GNWTRHQVEVQDGTGKVLSYNSDILVVEAASINEDGTIVGTAFIRKPSYQFDSDGNIIVG 537
           GNWTRH+VEVQDGTGKVLSYNSDI VVEA+SINEDGTIVGTAFIRKPSYQFD +GNIIVG
Sbjct: 481 GNWTRHKVEVQDGTGKVLSYNSDIQVVEASSINEDGTIVGTAFIRKPSYQFDKNGNIIVG 540

Query: 538 ENGLPLFELSGSGDPVTAYIPRMVVLKPSTNGEACTVDDSTDTGNYERKGAASLAWLLAL 597
           ENGLPLFELSG+G+PVTAY+PRMVVLKP+TNG+ACTVDDSTDTGNYER+GAASLAWLLAL
Sbjct: 541 ENGLPLFELSGNGEPVTAYVPRMVVLKPATNGQACTVDDSTDTGNYERQGAASLAWLLAL 600

Query: 598 PLVWLRRRTR 607
           PLVWLRRR R
Sbjct: 601 PLVWLRRRVR 610