Pairwise Alignments

Query, 685 a.a., bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) from Shewanella sp. ANA-3

Subject, 623 a.a., 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB from Phaeobacter inhibens DSM 17395

 Score =  293 bits (751), Expect = 1e-83
 Identities = 199/604 (32%), Positives = 315/604 (52%), Gaps = 62/604 (10%)

Query: 21  GSDD-EQIVQADLRVLETTDLHTNIMDFNYYSGKEDPTIGLARTASLIHAARKEAKNS-- 77
           GSD  E      LR+L TTDLH N++  +YYS K DP  GL+R A+LI  AR EA  +  
Sbjct: 3   GSDQAEDSKVGSLRILATTDLHANLLSHDYYSDKPDPAQGLSRVATLIAQARHEAVENGA 62

Query: 78  --VLVDNGDLLQGSPMGDYMAKVGLQMGDVHPA--YKAMNLLDYEVGNIGNHEFNYGLDF 133
             +L+DNGD + G+P+    A+  L++ D+ PA   +A +LL Y+   +GNH+F++GLD 
Sbjct: 63  VTLLLDNGDSIFGTPI----AERPLELSDIRPAPVARAFDLLSYDAIGLGNHDFDFGLDQ 118

Query: 134 LNKSLHGAEFPYINANVYCTDDNGCWNDVKKGEHLFTPYI---IKEKQIVDSEGNNQTIK 190
           L ++L     P + +N+   D             L  P+    + E+ + D+ G    ++
Sbjct: 119 LRQALLRISCPVLCSNMRALDPQ-----------LSLPFCQSTVLERALPDTSGT-PPLR 166

Query: 191 IGYIGFVPPQILLWDKQNLTGKVTVEDIVATAKKYVPEMKAKGADLIIAIPHSGIGSTEN 250
           IG I  +P Q L W    L GKVT++D+V +A+ +   ++ +G D+I+A+ H+GIG  E 
Sbjct: 167 IGLISVLPMQTLKWAAHQLQGKVTIDDMVQSARDHAAALREQGCDVIVALAHTGIG--EG 224

Query: 251 PGDPMAENATYALTYVDGINAILFGHSHSIFPDAKYADLPNTDVTKGLLNGVPAVMPGRW 310
                 ENA + L  +  ++AI+ GH+H   PD ++                P VMPG  
Sbjct: 225 HATYGIENALHQLANLGVLDAIVGGHTHLTLPDPRHP------------VSAPVVMPGAH 272

Query: 311 GDNLGVVDFKLERKDGKWSVLSATTKARPIY-------DGATKTPLVEADAAIHDAVAAE 363
           G +LGV+D ++     +W+V  AT   RPI         G   TPLV+ D A+  A+A +
Sbjct: 273 GSHLGVIDLRMTWNSDRWAVTKATCTLRPIARRRTIGGAGGVLTPLVDEDPAMVAALAED 332

Query: 364 HQGTLAFVDEPIGVAAADMYSFLTLVQDDPTVQIVSDAQIANVKAKLPEAL-KDLPVLSA 422
           H  T   + +P+G  +  ++S+ T +  D  + +V+ AQ A V+  L + L  +LP+LSA
Sbjct: 333 HAETRTRMAQPVGRTSQPLHSYFTFLGRDQALALVAWAQAAAVRPALTDTLASNLPLLSA 392

Query: 423 SAPFKAGGRHGTTSDADQYVQVDKGALTFKNAADLYLYPNTMVAVKATGAELKDWLECSV 482
           +AP K G R G ++    Y  V  G +  ++  D+  +PN +  V   GA+L+DWLE S 
Sbjct: 393 TAPGKFGARSGPSN----YTDVPIGQMYMRHVVDIQPFPNELRTVVLDGAQLRDWLEMSA 448

Query: 483 NQFNQIDPTKTTPQELINWDGHPTYNFDVLDGLTYKIDVTQPSKFDRDCAVVNANANRIV 542
             FNQI P  T    L++ D    +NFDV+ G+ Y IDV+ P++F  D  + N ++ RI 
Sbjct: 449 GLFNQIAP-GTFGSPLLD-DDRAGHNFDVIFGVQYDIDVSAPARFASDGELANPDSYRIR 506

Query: 543 DLSYTDTNGKVFTGEEFAAKEFIVASNNYRAFGGKFAGTGSDHVVLELPDTN-REALAAY 601
           +L +     +        ++ F VA ++YR  GG           L +P    R+A+  Y
Sbjct: 507 NLRWKGAPVR-------DSQHFAVAVSSYRIGGGGNFAMAQAATPLPIPPLRVRDAIRDY 559

Query: 602 ITAQ 605
           +  +
Sbjct: 560 VAGR 563