Pairwise Alignments

Query, 324 a.a., methionine gamma-lyase (RefSeq) from Shewanella sp. ANA-3

Subject, 279 a.a., inner membrane protein YfdC from Phaeobacter inhibens DSM 17395

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 36/247 (14%)

Query: 40  VKAPWQSFGLAVFAGAFIALAFVFYLTVTTGAGDSAWGLVRLVGGIAFSLGLILVVICGG 99
           V+A W S    + AG  I+ + +      T   D++W    LV  + +SLG ++V++   
Sbjct: 48  VRALWWS---GIAAGLLISFSVLGKAVFKTHLPDASWS--PLVENLGYSLGFLMVILGRM 102

Query: 100 ELFTSSVLSSVAWAQKQVTTSELL---KCWSRVYIGNFVGAMLMVGLIMAAGLYELDGGN 156
           +LFT + +++V     +   +  L   + W  V   N VGA L+        + + D   
Sbjct: 103 QLFTENTITTVVPVMLRWDKASFLRTARLWGVVLAANVVGAFLIASFFALTPVLDAD--- 159

Query: 157 WGLNA--LKVSQHKLHHTWVQAFSLGILCNMLVCLGIWMTFASRESLTKAILLILPVAMF 214
             L A  +K+S+H      +     GI   +L+   +WM  +++ S  +  L+I+   + 
Sbjct: 160 --LRAAMVKISEHATGMPPLIGLISGIPSGILIAAIVWMLPSTQHS--EIPLIIIFTWLI 215

Query: 215 VSSGFEHSIANLFMVPLGITIQSVASPEFFASLGVTQEQFADLTVANFVFNNLIPVTLGN 274
            +  F H +A    +   + +Q +                  L +   +F   IPV +GN
Sbjct: 216 AAGDFTHIVAGSVEMAF-LMVQGL------------------LPLWQAIFGFFIPVLIGN 256

Query: 275 IVGGGVI 281
           ++GG  +
Sbjct: 257 VIGGTAV 263