Pairwise Alignments

Query, 368 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 650 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  129 bits (323), Expect = 3e-34
 Identities = 93/369 (25%), Positives = 173/369 (46%), Gaps = 36/369 (9%)

Query: 6   TPSAAYKGFAVMAFVVIILAGIKAASPIVVPFVLSSFIAVICNPAIGLMTKYRVPKWLAV 65
           TPS    G A +   V+++ G+     +++P  LS  ++ +  P + ++ ++ + +  ++
Sbjct: 19  TPSL--HGLASVITGVVVVCGLYFGRAVLIPITLSVLLSFLLAPLVQMLRRFHMGQLPSI 76

Query: 66  ILLMGFIVLMGLWLASLVGSSINEFSKQLPQYRDQLVEQFSWVLHKL------------- 112
            + + F +   L + +L+ + + + +  LPQY++ + ++   V  K              
Sbjct: 77  FIAVLFALASLLAVGALITAQLVQLAADLPQYQEAIEQKIETVQEKTVGRADSLMSRAAV 136

Query: 113 ------------------QALNIQISKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLI 154
                              A N     + V  +      + +    LS     +   F++
Sbjct: 137 ALQRVSPPKPNPPRPTGRAARNAPAVPQPVEVHEPAPTPMQLAQRALSPAIAPIETTFIV 196

Query: 155 ILTIVFMLFEAQSLPKKLHLALDDPDMR--LQQIDRFLQSVNQYMVIKTLVSLATGLIVG 212
           ++  +F+L + + L  +L       D+      I+     +++Y V +  V+L+ G ++ 
Sbjct: 197 LVVTIFILLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSRYFVAQLGVNLSAGGVIA 256

Query: 213 VGLAVIGVDYALLWAVIAFLFNYIPNIGSIIAAIPAVLLAF-IQLGPAAAGGTALLYVAA 271
           +GLA+IGV  ALL+ VIA L  ++P IG  IAAI AV LA  IQ     A  T +L++  
Sbjct: 257 IGLAIIGVPGALLFGVIAALLRFVPYIGIWIAAILAVFLAAAIQPQWTMAVYTLILFIVV 316

Query: 272 NMVMGNLVEPKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMVVKIALESSKSG 331
           ++V G + EP   G   GLS L V ++ IFW WL G +G++LS PLT+ V      +   
Sbjct: 317 DVVAGQIAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVLSTPLTLCVVTLGRYADRL 376

Query: 332 SWLAILLSD 340
           ++L +LL D
Sbjct: 377 NFLTVLLGD 385