Pairwise Alignments

Query, 368 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 677 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  103 bits (257), Expect = 1e-26
 Identities = 79/381 (20%), Positives = 164/381 (43%), Gaps = 42/381 (11%)

Query: 2   TRSNTPSAAYK--GFAVMAFVVIILAGIKAASPIVVPFVLSSFIAVICNPAIGLMTKYRV 59
           T    P+ A+       +A  V ++A +  AS +++P  L+  ++ +  P    + + R+
Sbjct: 14  THIRAPATAFSLDSLISLAVGVTVVACLYFASAVLIPITLAILLSFLVAPLANALMRLRL 73

Query: 60  PKWLAVILLMGFIVLMGLWLASLVGSSINEFSKQLPQYRDQLVEQF----SWVLHKLQAL 115
               +V   +   V +   L +++ + + + +  +P+Y+  + ++     S  + KL   
Sbjct: 74  GHVASVFAAVVISVSVIGMLGAVIATQLTDLAAGMPRYQATIEQKMETAHSLTIGKLNRF 133

Query: 116 NIQISKEQVLAYFDPGMA---------------------------------LSMTTNMLS 142
                +    A  +P                                      +   +LS
Sbjct: 134 ASAAGQALQRATVEPPQPAPQRGPASRDSARSTASEPAAVPVEVREPVPTPFELARRVLS 193

Query: 143 GVGNVMANLFLIILTIVFMLFEAQSLPKKLHLALDDPDMRLQQ--IDRFLQSVNQYMVIK 200
              + +   F++ + +V +L +   L  +        D+      +D   + +++Y V +
Sbjct: 194 PAISPLETAFIVFVVMVVILLQRDDLRDRAIRLFGSRDLHRTTTVMDEAARRLSRYFVSQ 253

Query: 201 TLVSLATGLIVGVGLAVIGVDYALLWAVIAFLFNYIPNIGSIIAA-IPAVLLAFIQLGPA 259
             ++   G+I+G GL +IGV   +LW ++A L   +P +G  I+A +   L A +  G  
Sbjct: 254 LGLNAGVGVIIGTGLFMIGVPSPILWGILAALLRLVPYVGIWISATLATALAAAVSPGWT 313

Query: 260 AAGGTALLYVAANMVMGNLVEPKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTM 319
            A  +  L+V+  +++G +VEP   GR  GLS   V ++ IFW W+ G +G++LS PLT+
Sbjct: 314 MAIWSLALFVSVEVLVGQIVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTL 373

Query: 320 VVKIALESSKSGSWLAILLSD 340
            + +     +   +L +LL D
Sbjct: 374 CLLVLGRHVRRLEFLDVLLGD 394