Pairwise Alignments

Query, 1433 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

Subject, 1258 a.a., Serine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  395 bits (1016), Expect = e-113
 Identities = 212/571 (37%), Positives = 337/571 (59%), Gaps = 11/571 (1%)

Query: 863  GTIKNISQFKQKEEQLKLFEKAIENISEGMFILDSEYRFVEVNEACCRISQ---RNRTDF 919
            G  ++ISQ ++ E+ L++     E+ +  + I D     V+ NEA  R+S        D 
Sbjct: 682  GVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSQVLDQ 741

Query: 920  IGNLLTFDLYPESFSNQIRTMLKQQGRWASEVEASRGDNSHFHMELTIDAIYDELGELSH 979
            + N+LT D   E+    +   L+Q   W  EV   R +  H+   + I A+ D+ G+L+ 
Sbjct: 742  LPNMLTVDEQQEAHLRYVLKQLQQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLAS 801

Query: 980  YVGVFSDISRRKQQEEELRKLTNNDLLTGLPNRS----NLQVTLGNLVNKEITHALMVLD 1035
            YV  FSDIS RK  E+ + +L   D LT LPNR+     L   L +   ++    LM LD
Sbjct: 802  YVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQSADRQKTWVVLMFLD 861

Query: 1036 LDNFKRINDSLGHQIGDQLLKLVSIRIKSILPKNTSIYRLGGDEFAIVLDKTSD----IS 1091
            LD FK INDSLGH  GD++LK ++ R+   +  + ++ R+GGDEF ++L   +     ++
Sbjct: 862  LDRFKPINDSLGHAAGDRMLKEMATRLLGCVADDDTVARMGGDEFTLLLQPRASREMALN 921

Query: 1092 ASAAIAGRVIEAFKTMFEIGNEQLVLGVSIGIVFYPEDEQSEQALLRKADIAMYHAKSAG 1151
             +  +A +++ +    F +   +  +  SIGI   P+D      L++ AD AMYHAK  G
Sbjct: 922  RAINVAEQILASLVRPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERG 981

Query: 1152 GNCYQFYSESLNQHAIKQLEIENLIREGLKEDLFEVYYQPKVDLKSGHVAGMEALVRLNH 1211
             N +QFY   +N  A+++LE+E+ +R  L+++ F +YYQP+       + G EAL+R  H
Sbjct: 982  KNNFQFYQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRH 1041

Query: 1212 PTRGLIPPNDFIPLAEENGLIIEIGEIVLRKACFAAQKWREQGLFKGRVAVNLSSRQFAL 1271
            P RGL+PP DFIP+ EE GL++++G+ V+ +AC   + W +  +   +V+VN+S+RQF+ 
Sbjct: 1042 PRRGLVPPGDFIPVLEELGLVVDVGDWVITEACRQLRTWHQAKVRVPKVSVNISARQFSD 1101

Query: 1272 PDLQQRIESILRLTQLPASHLELEITEGTVIKQPEMAITVMQQLAKMGVSLALDDFGTGY 1331
              L  RI +ILR T LP + LELE+TE  ++++   A+ ++  L  +G+S+A+DDFGTGY
Sbjct: 1102 GQLGTRIANILRSTGLPPACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGY 1161

Query: 1332 SSLSYLKRFPIHTLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEQAAQLN 1391
            SSL+YLK+FPI  LKID+ FVD +   ++D ++  +II +AH++ L+V+ EGVE   QL+
Sbjct: 1162 SSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLD 1221

Query: 1392 ILRALNCEEIQGYIFSKAINEIEFTQLLQDD 1422
             LR   C+E+QGY+F + +    F     +D
Sbjct: 1222 FLREHGCDEVQGYLFGRPMPANRFEAQFSND 1252



 Score = 40.8 bits (94), Expect = 9e-07
 Identities = 44/223 (19%), Positives = 89/223 (39%), Gaps = 28/223 (12%)

Query: 797 NSDEESNIHPMEQERVREALNKHFYGETDHFEAAYRVKGKDDSWIWILDRAKIVERDDKD 856
           +SD+  + H + Q + R        G T   +   R + ++  W     R + + RD  +
Sbjct: 483 HSDDADHYHSLRQAQRRG-------GYTQLLQCQLRFRHRNGKWRCFDIREQALARDRDN 535

Query: 857 NALRMTGTIKNISQFKQKEEQLKLFEKAI----ENISEGMFILDSEYRFVEVNEACCRIS 912
              R+ G  K++++  +  E L+  E+      E+IS+ +F  D++     V+ +   + 
Sbjct: 536 QVTRIIGVAKDVTEQIEASESLRDSEQRYRMLAESISDVIFSTDNKLSLNYVSPSVQAVL 595

Query: 913 Q---------------RNRTDFIGNLLTFDLYPESFS--NQIRTMLKQQGRWASEVEASR 955
                            N     G     D   ++    +Q+  +  Q        +  R
Sbjct: 596 GYTADWIFQNGWQSIIANPQQLTGIYSLMDRVSKALDKPDQLAELRNQMQTQLFLFDCLR 655

Query: 956 GDNSHFHMELTIDAIYDELGELSHYVGVFSDISRRKQQEEELR 998
            D     +EL +  ++DE G     +GV  DIS++++ E++LR
Sbjct: 656 ADGRKIPIELRLVLVWDEHGAFEGVLGVGRDISQQRRAEKDLR 698