Pairwise Alignments

Query, 1433 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

Subject, 946 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  471 bits (1211), Expect = e-136
 Identities = 261/680 (38%), Positives = 396/680 (58%), Gaps = 8/680 (1%)

Query: 749  IALSEERLKLSLWGSGDEMWDWDIETGNIFRSNIWGALEFPRDGHRSGNSDEESNIHPME 808
            ++ SE RL L+L  S   +WDW+++T  +  + +        +   +  +     +HP +
Sbjct: 261  LSKSEARLALALKASELGLWDWNLQTDEVHHTQLKELFGLEPEYITAMLTHLTPRLHPQD 320

Query: 809  QERVREALNKHFYGETDHFEAAYRVKGKDDSWIWILDRAKIVERDDKDNALRMTGTIKNI 868
               ++ AL +H  G ++ ++  YRV+  D  W+WI DR + VER      LRM GT ++I
Sbjct: 321  LPALKRALVEHLKGRSEDYQIEYRVRHGDGHWVWIEDRGRAVERSVSGRVLRMVGTRRDI 380

Query: 869  SQFKQKEEQLKLFEKAIENISEGMFILDSEYRFVEVNEACCRISQRNRTDFIG-NLLTFD 927
            S  K+ E+Q +L     E  SEG+ I D  Y  +  N+A  R++  N  D +G N++   
Sbjct: 381  STSKELEQQRQLAATVFEAASEGIVIFDPHYVLLAANQAFTRVTGFNIDDMLGRNVVDLP 440

Query: 928  LYPESFSNQ--IRTMLKQQGRWASEVEASRGDNSHFHMELTIDAIYDELGELSHYVGVFS 985
               ++  +   IR  LKQ G W  E+  +R +   +   L ++ + +  G +SH VG F+
Sbjct: 441  CSRDARRHYPVIRQALKQHGTWQGELVEARANGELYPQWLQLNVVRNARGNVSHIVGFFA 500

Query: 986  DISRRKQQEEELRKLTNNDLLTGLPNRSNLQVTLGNLVNK-----EITHALMVLDLDNFK 1040
            D+S R++ EE +R LT+ D LTGL NRS  +  L     +       + AL+ ++LD FK
Sbjct: 501  DLSARRESEERMRYLTHYDELTGLANRSLFRERLHEAHQRVRQGGRRSLALLHINLDRFK 560

Query: 1041 RINDSLGHQIGDQLLKLVSIRIKSILPKNTSIYRLGGDEFAIVLDKTSDISASAAIAGRV 1100
             +NDSLGH I DQLL+ ++ R+ + LP+  +I RL GDEFA++ D   ++S+ A +A R+
Sbjct: 561  LLNDSLGHDIADQLLQKMARRLINALPEADTIARLSGDEFAVLFDAYGNLSSLARVATRL 620

Query: 1101 IEAFKTMFEIGNEQLVLGVSIGIVFYPEDEQSEQALLRKADIAMYHAKSAGGNCYQFYSE 1160
                +    I   +LVL  SIGI   P++ +    L+ +A++AM HAK  GGN +QFY++
Sbjct: 621  AAKLRVPLTIEGHELVLSASIGISLLPDNTREVAMLVSQANMAMQHAKHLGGNNFQFYTD 680

Query: 1161 SLNQHAIKQLEIENLIREGLKEDLFEVYYQPKVDLKSGHVAGMEALVRLNHPTRGLIPPN 1220
            SL    +++L++EN +R+ L+E   +V+YQPK+ L +G +   EALVR +HP  G +PP 
Sbjct: 681  SLQASTLERLQLENQLRKALEEQQLKVFYQPKLCLATGRLNAAEALVRWDHPAMGRVPPG 740

Query: 1221 DFIPLAEENGLIIEIGEIVLRKACFAAQKWREQGLFKGRVAVNLSSRQFALPDLQQRIES 1280
            DFI LAEE GLI  IGE VLR+AC+ A +W+ QGL   RV+VNLS  Q     L   +  
Sbjct: 741  DFIGLAEETGLIGPIGEFVLRQACWQACEWQRQGLAPIRVSVNLSVHQLRQGKLVSLVRQ 800

Query: 1281 ILRLTQLPASHLELEITEGTVIKQPEMAITVMQQLAKMGVSLALDDFGTGYSSLSYLKRF 1340
            +L  T L   +LELE+TE  ++   E  I   QQL  +GV LA+DDFGTGYSSLSYLKR 
Sbjct: 801  VLEETGLAPQYLELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYLKRI 860

Query: 1341 PIHTLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEQAAQLNILRALNCEE 1400
            P+  +KID+AF+  + +   D  +  +II +AH + L VV EGVE+  QL  LR+  C+E
Sbjct: 861  PVDYVKIDQAFIRGLGEGSVDAAITRAIIAMAHGLSLKVVAEGVERQEQLEFLRSERCDE 920

Query: 1401 IQGYIFSKAINEIEFTQLLQ 1420
            +QGY+ S+ +       LL+
Sbjct: 921  VQGYLVSRPVEAEGLAGLLR 940