Pairwise Alignments

Query, 1433 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

Subject, 1248 a.a., sensory box/GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N1B4

 Score =  376 bits (965), Expect = e-108
 Identities = 211/557 (37%), Positives = 320/557 (57%), Gaps = 7/557 (1%)

Query: 866  KNISQFKQKEEQLKLFEKAIENISEGMFILDSEYRFVEVNEACCRISQRNRTDFIGN--- 922
            ++I++    +E+L+      E+ +EG+ I D++     VN A   I+  + ++ +G+   
Sbjct: 670  RDITERHLMQEKLQQAATVFESTAEGVLITDTQQHISAVNRAFTEITGYSESEALGHTPR 729

Query: 923  LLTFDLYPESFSNQIRTMLKQQGRWASEVEASRGDNSHFHMELTIDAIYDELGELSHYVG 982
            LL   L+  +F   +   L   G W  E+   R +   +   LTI A+ +    ++H+V 
Sbjct: 730  LLASGLHDSAFYAAMWHQLTADGHWQGEISNRRKNGELYPSWLTISAVRNREKFITHFVA 789

Query: 983  VFSDISRRKQQEEELRKLTNNDLLTGLPNRSNLQVTLGNLVNKEITH----ALMVLDLDN 1038
            VF+DIS  K  + +L    ++D LTGLPNR+  +  L   +N +  +    A++ LDLD 
Sbjct: 790  VFADISSLKHAQAKLDYQAHHDPLTGLPNRTLFESRLLTALNSQQENGGQGAVLFLDLDR 849

Query: 1039 FKRINDSLGHQIGDQLLKLVSIRIKSILPKNTSIYRLGGDEFAIVLDKTSDISASAAIAG 1098
            FK INDSLGH +GD LLK +++R+K  L    ++ RLGGDEF I+L      S +  IA 
Sbjct: 850  FKHINDSLGHPVGDLLLKGIAVRLKEQLRDIDTVARLGGDEFIILLPGLQQSSDADNIAT 909

Query: 1099 RVIEAFKTMFEIGNEQLVLGVSIGIVFYPEDEQSEQALLRKADIAMYHAKSAGGNCYQFY 1158
            +++  F   F+ G  +  +  SIG   YP+D      L++ AD AMY +K+ G N  + Y
Sbjct: 910  KLLNCFSAPFQAGEHEFFISASIGTSLYPKDGCDVATLVKNADAAMYRSKAKGRNRVESY 969

Query: 1159 SESLNQHAIKQLEIENLIREGLKEDLFEVYYQPKVDLKSGHVAGMEALVRLNHPTRGLIP 1218
            +  L   A +++ +E+ +R  ++ +   +YYQPK+ L    V G EAL+R +HPT G +P
Sbjct: 970  TRDLTAQASERVALEHELRRAIERNELFLYYQPKISLDDHRVVGAEALIRWHHPTFGDVP 1029

Query: 1219 PNDFIPLAEENGLIIEIGEIVLRKACFAAQKWREQGLFKGRVAVNLSSRQFALPDLQQRI 1278
            P  FIPLAEENG+I++IG+ VL  AC    +W +     G ++VNL+  Q   P+L  RI
Sbjct: 1030 PEHFIPLAEENGMILQIGDWVLETACRQMYEWNQVYECLGPLSVNLAGAQLRQPNLLGRI 1089

Query: 1279 ESILRLTQLPASHLELEITEGTVIKQPEMAITVMQQLAKMGVSLALDDFGTGYSSLSYLK 1338
            E +L+   L    L+LEITE  ++ Q E A+ V+ QL ++GV LA+DDFGTGYSSLSYLK
Sbjct: 1090 EQLLKDNHLNPGFLQLEITENFIMSQAEEALAVLHQLKRLGVQLAIDDFGTGYSSLSYLK 1149

Query: 1339 RFPIHTLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEQAAQLNILRALNC 1398
            R P+  LKID++FV  +     D  +V +II +  +M  +V+ EGVE  AQ   L A  C
Sbjct: 1150 RLPLDILKIDQSFVRGLPDDPHDAAIVRAIIALGRSMQFTVIAEGVETQAQQQFLTAEGC 1209

Query: 1399 EEIQGYIFSKAINEIEF 1415
            E+IQGYI S  +   EF
Sbjct: 1210 EQIQGYIVSLPLPPDEF 1226