Pairwise Alignments

Query, 1433 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

Subject, 957 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N1B4

 Score =  477 bits (1227), Expect = e-138
 Identities = 264/700 (37%), Positives = 405/700 (57%), Gaps = 17/700 (2%)

Query: 740  LRKREIQRQIAL---------SEERLKLSLWGSGDEMWDWDIETGNIFRSNIWGALEFPR 790
            L  R +QR + L         SE RL L+L  S   +WDW+++T  +  + +        
Sbjct: 254  LENRVVQRSLELDAANQALSKSEARLALALKASELGLWDWNLQTDEVHHTQLQELFGLEP 313

Query: 791  DGHRSGNSDEESNIHPMEQERVREALNKHFYGETDHFEAAYRVKGKDDSWIWILDRAKIV 850
            +   +     +  +HP +   ++ AL +H  G T+ ++  YRV+  D  W+WI DR + V
Sbjct: 314  EYVTAMLRHLKPRLHPDDLPALKRALVEHLKGRTEDYQIEYRVRHSDGHWVWIEDRGRAV 373

Query: 851  ERDDKDNALRMTGTIKNISQFKQKEEQLKLFEKAIENISEGMFILDSEYRFVEVNEACCR 910
            ER +    +RM GT ++IS  K  EEQ +L     E  SEG+ ILD  Y  +  N+A  R
Sbjct: 374  ERSENGRVIRMVGTRRDISASKHLEEQRQLAATVFEAASEGIVILDPNYALIAANQAFSR 433

Query: 911  ISQRNRTDFIG-NLLTFDLYPESFSNQ--IRTMLKQQGRWASEVEASRGDNSHFHMELTI 967
            ++  +  D +G N++      ++  +   IR  L+  G W  E+  +R +   +   L +
Sbjct: 434  VTGYDIDDMLGRNVVELPCSRDARRHYAAIRQALELHGSWQGELVETRKNGELYPQWLQL 493

Query: 968  DAIYDELGELSHYVGVFSDISRRKQQEEELRKLTNNDLLTGLPNRSNLQVTLGNLVNK-- 1025
            +A+ D  G++SH VG F+D+S R++ EE +R L + D LTGL NRS  +  L     +  
Sbjct: 494  NAVRDSRGKVSHIVGFFADLSARRESEERMRYLAHYDELTGLANRSLFRERLHEAHQRVR 553

Query: 1026 ---EITHALMVLDLDNFKRINDSLGHQIGDQLLKLVSIRIKSILPKNTSIYRLGGDEFAI 1082
                 + AL+ ++LD FK +NDSLGH+I DQLL+ +S R+ + LP+  +I RL GDEFA+
Sbjct: 554  QGGRRSLALLHINLDRFKLLNDSLGHEIADQLLQKMSRRLVNALPEADTIARLSGDEFAV 613

Query: 1083 VLDKTSDISASAAIAGRVIEAFKTMFEIGNEQLVLGVSIGIVFYPEDEQSEQALLRKADI 1142
            + D   ++S+ A +A R+    +    +   +LV+  S+GI   P+  +   AL+ ++++
Sbjct: 614  LFDTYGNLSSLARVATRLSTKLRLPITVEGHELVMSASMGISLLPDTAREISALVSQSNM 673

Query: 1143 AMYHAKSAGGNCYQFYSESLNQHAIKQLEIENLIREGLKEDLFEVYYQPKVDLKSGHVAG 1202
            AM HAK  GGN +QFY++SL    +++L++EN +R+ ++E   +V+YQPK+ L +G +  
Sbjct: 674  AMQHAKHLGGNNFQFYTDSLQASTLERLQLENQLRKAIEEKQLKVFYQPKLCLATGRLNA 733

Query: 1203 MEALVRLNHPTRGLIPPNDFIPLAEENGLIIEIGEIVLRKACFAAQKWREQGLFKGRVAV 1262
             EALVR +HPT G +PP  FI LAEE GLI  IGE VLR+AC+ A +W+ QGL   RV+V
Sbjct: 734  AEALVRWHHPTLGQVPPGSFIGLAEETGLIGAIGEFVLRQACWQACEWQRQGLEPIRVSV 793

Query: 1263 NLSSRQFALPDLQQRIESILRLTQLPASHLELEITEGTVIKQPEMAITVMQQLAKMGVSL 1322
            NLS  Q     L   +  +L  T L   +LELE+TE  ++   E  I   QQL  +GV L
Sbjct: 794  NLSVHQLRQGKLVSLVRQVLEETGLAPHYLELELTESQLLDSVEHIIATFQQLRDLGVKL 853

Query: 1323 ALDDFGTGYSSLSYLKRFPIHTLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGE 1382
            A+DDFGTGYSSLSYLKR P+  +KID+AF+  + +S  D  +  +II +AH + L VV E
Sbjct: 854  AIDDFGTGYSSLSYLKRIPVDYVKIDQAFIRGLGESSEDAAITRAIIAMAHGLSLKVVAE 913

Query: 1383 GVEQAAQLNILRALNCEEIQGYIFSKAINEIEFTQLLQDD 1422
            GVE+  QL  L+   C+E+QGY+ S+ +      +LL+ D
Sbjct: 914  GVERPEQLEFLKVERCDEVQGYLISRPVEAANLAELLRRD 953