Pairwise Alignments

Query, 1433 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

Subject, 1278 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  395 bits (1015), Expect = e-113
 Identities = 212/571 (37%), Positives = 339/571 (59%), Gaps = 11/571 (1%)

Query: 863  GTIKNISQFKQKEEQLKLFEKAIENISEGMFILDSEYRFVEVNEACCRISQRNRT---DF 919
            G  ++ISQ ++ E+ L++     E+ +  + I D     V+ NEA  R+S        D 
Sbjct: 702  GVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFTRVSGYEVAQVLDQ 761

Query: 920  IGNLLTFDLYPESFSNQIRTMLKQQGRWASEVEASRGDNSHFHMELTIDAIYDELGELSH 979
            +  +LT +   E+    I   L  QG W  E+   R +  H+   + I A+ D+ G+L+ 
Sbjct: 762  LPGMLTVESEQETRLRHILRQLNGQGTWEGEIRLKRRNGEHYPAWVGITAVLDDEGDLAS 821

Query: 980  YVGVFSDISRRKQQEEELRKLTNNDLLTGLPNRS----NLQVTLGNLVNKEITHALMVLD 1035
            YV  FSDIS RK  E+ + +L   D LT LPNR+     L   L +   ++    LM LD
Sbjct: 822  YVCFFSDISERKASEDRIHRLAYYDALTHLPNRTLFQDRLHSALQHAERQQAWVVLMFLD 881

Query: 1036 LDNFKRINDSLGHQIGDQLLKLVSIRIKSILPKNTSIYRLGGDEFAIVLD----KTSDIS 1091
            LD FK INDSLGH  GD++L+ ++ R+ + +  + ++ R+GGDEF ++L+    + + ++
Sbjct: 882  LDRFKPINDSLGHAAGDRMLQEMATRLLACVSVDDTVARMGGDEFTLLLEPDESREAALN 941

Query: 1092 ASAAIAGRVIEAFKTMFEIGNEQLVLGVSIGIVFYPEDEQSEQALLRKADIAMYHAKSAG 1151
             +  +A R++ +  T F +   +  +  SIGI   P+D +    L++ AD AMYHAK  G
Sbjct: 942  RAIHVAERILTSLITPFVLEGREFFVTASIGIALSPQDGKELSQLMKNADTAMYHAKERG 1001

Query: 1152 GNCYQFYSESLNQHAIKQLEIENLIREGLKEDLFEVYYQPKVDLKSGHVAGMEALVRLNH 1211
             N +QFY   +N  A+++LE+E+ +R  L++  F ++YQP+       + G EAL+R  H
Sbjct: 1002 KNNFQFYQADMNATALERLELESDLRHALEQKEFTLFYQPQFSGDGKRLTGAEALLRWRH 1061

Query: 1212 PTRGLIPPNDFIPLAEENGLIIEIGEIVLRKACFAAQKWREQGLFKGRVAVNLSSRQFAL 1271
            P RGL+PPNDFIP+ EE GL++E+G+ VL +AC   + W +  +   +V+VN+S+RQF+ 
Sbjct: 1062 PRRGLVPPNDFIPVLEELGLVVEVGDWVLAEACRQLKHWHQARVRVPKVSVNISARQFSD 1121

Query: 1272 PDLQQRIESILRLTQLPASHLELEITEGTVIKQPEMAITVMQQLAKMGVSLALDDFGTGY 1331
              L +RI  IL    L  + LELE+TE  ++++   A+ ++  L  +G+S+A+DDFGTGY
Sbjct: 1122 GQLGKRIAHILEQAGLSPACLELELTESILMREVNEAMQILDGLKNLGLSIAVDDFGTGY 1181

Query: 1332 SSLSYLKRFPIHTLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEQAAQLN 1391
            SSL+YLK+FPI  LKID+ FVD +   ++D ++  +II +AH++ LSV+ EGVE   QL 
Sbjct: 1182 SSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLSVIAEGVETHEQLE 1241

Query: 1392 ILRALNCEEIQGYIFSKAINEIEFTQLLQDD 1422
             LR  +C+E+QGY+F + +   +F     +D
Sbjct: 1242 FLREHDCDEVQGYLFGRPMPPAQFEAQFSND 1272



 Score = 42.0 bits (97), Expect = 4e-07
 Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 24/229 (10%)

Query: 793 HRSGNSDEESNIHPMEQERVREA-LNKHFYGETDHFEAAYRVKGKDDSWIWILDRAKIVE 851
           H  G    E  +HP +    ++  L +  +G  +  ++  R + ++ +W     R + + 
Sbjct: 491 HAMGEFFWEVLLHPDDARHYQDMRLRQRHHGHNELLQSVLRFRDRESNWRSFDIREQALA 550

Query: 852 RDDKDNALRMTGTIKNISQFKQKEEQLKLFEKAI----ENISEGMFILDSEYRFVEVNEA 907
            D +D   R+ G  K+I++     + L+  E+      E+IS+ +F  D       V+ +
Sbjct: 551 WDAEDRVTRIIGIAKDITEQVASSQSLRDSEQRYRMLAESISDVIFSTDGRLAVNYVSPS 610

Query: 908 CCR--------ISQRNRTDFIGN---LLTFDLYPESFSNQIRTMLKQQGRWASEV----- 951
             R        I Q   +  I N   ++ FD       +++    ++  R   EV     
Sbjct: 611 VERALGYSAEWIIQNGWSAAIANPQQIVGFDALMSRI-DKVLDKPQELARLREEVTTRMF 669

Query: 952 --EASRGDNSHFHMELTIDAIYDELGELSHYVGVFSDISRRKQQEEELR 998
             +  R D     +EL +  ++ E G      GV  DIS++++ E++LR
Sbjct: 670 LFDCLRADGRKIPVELRVVLVWGEHGNFEGIFGVGRDISQQRRAEKDLR 718