Pairwise Alignments

Query, 1433 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

Subject, 737 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  392 bits (1007), Expect = e-113
 Identities = 221/561 (39%), Positives = 337/561 (60%), Gaps = 13/561 (2%)

Query: 876  EQLKLFEKAIENISEGMFILDS---EYRFVEVNEACCRISQRNRTDFIGN---LLTFDLY 929
            E L+L ++A+E+ S G+ I  +   ++    VN A  RI+  +  +  G     L  D  
Sbjct: 165  EALRLRDRAVESSSNGIMITSATQLDHPITYVNPAFERITGYSAAEVQGRNGRFLVRDDL 224

Query: 930  PESFSNQIRTMLKQQGRWASEVEASRGDNSHFHMELTIDAIYDELGE-LSHYVGVFSDIS 988
             +   N+IR  L+ +    + +   R D S F  EL +  + DE G+  +H+V V +D+S
Sbjct: 225  QQKGLNEIRAALRDRREGHAILRNYRKDGSLFWNELHLAPVLDESGQSTTHFVSVINDVS 284

Query: 989  RRKQQEEELRKLTNNDLLTGLPNRSNLQVTLGNLV-----NKEITHALMVLDLDNFKRIN 1043
             R   +E+L     +D+LTGL NRS L   +   +     ++ +   +M+LDLD FK IN
Sbjct: 285  DRIHYQEQLEYQATHDVLTGLANRSLLADRISQAIALARRDRRLV-GVMLLDLDRFKVIN 343

Query: 1044 DSLGHQIGDQLLKLVSIRIKSILPKNTSIYRLGGDEFAIVLDKTSDISASAAIAGRVIEA 1103
            D LGH   D+LLK V+ R+++ +    ++ RLGGDEF IV+    D    A +AG++  A
Sbjct: 344  DGLGHAPADKLLKTVAERLQTAVRDTDTVARLGGDEFVIVVGDILDADDVAVVAGKIQRA 403

Query: 1104 FKTMFEIGNEQLVLGVSIGIVFYPEDEQSEQALLRKADIAMYHAKSAGGNCYQFYSESLN 1163
                  +  ++L +  SIG+  +P D ++   LLR AD+AMY  K  G N Y+FY   ++
Sbjct: 404  LAQPLFVEGKELFVTASIGVSLFPRDGETGDILLRNADVAMYRVKEYGRNNYRFYLPEMS 463

Query: 1164 QHAIKQLEIENLIREGLKEDLFEVYYQPKVDLKSGHVAGMEALVRLNHPTRGLIPPNDFI 1223
              A+ +L++E  +R  L+ D F+VYYQPKV L+ G + G EAL+R  HP  G I PN+FI
Sbjct: 464  SMALDRLDMEGNLRRALETDEFQVYYQPKVSLQQGTIVGAEALLRWMHPRIGQINPNEFI 523

Query: 1224 PLAEENGLIIEIGEIVLRKACFAAQKWREQGLFKGRVAVNLSSRQFALPDLQQRIESILR 1283
            PLAEE+GLII +GE V+   C   + WRE+GL   +VA+N+S+RQF   +L + +  +L 
Sbjct: 524  PLAEESGLIIPLGEKVIELVCRQIRAWREEGLPPLKVAINISARQFRQENLGETVRRLLE 583

Query: 1284 LTQLPASHLELEITEGTVIKQPEMAITVMQQLAKMGVSLALDDFGTGYSSLSYLKRFPIH 1343
              Q+P   L++E+TE  V+   + A   +++L  +GV+L+LDDFGTGYSSLSYLKRFPI 
Sbjct: 584  EYQVPGEMLDIELTESMVMHDTDHAALTLRELKDLGVTLSLDDFGTGYSSLSYLKRFPID 643

Query: 1344 TLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEQAAQLNILRALNCEEIQG 1403
             LKID++FV DI+ +  D  +  ++I +AH++GL+VV EGVE A QL +LR   C+E QG
Sbjct: 644  CLKIDRSFVRDINSNADDAAIASAVIAMAHSLGLNVVAEGVETAEQLALLRQHGCDEFQG 703

Query: 1404 YIFSKAINEIEFTQLLQDDRS 1424
            Y FS+A+   ++  LL+  ++
Sbjct: 704  YFFSRAVPAGDYALLLRQGKT 724