Pairwise Alignments

Query, 603 a.a., ATPase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

Subject, 599 a.a., C4-dicarboxylate transport sensor protein DctB from Phaeobacter inhibens DSM 17395

 Score =  211 bits (536), Expect = 9e-59
 Identities = 170/612 (27%), Positives = 280/612 (45%), Gaps = 66/612 (10%)

Query: 1   MLPMTPKAKQRLLMTIVLLAGLFAILKLTYWVHFHQGKIEIQQQSERQLKELVSFLDGAL 60
           M PMT     R ++  +LL  + A+    Y + + Q    + ++S   L      +   L
Sbjct: 1   MRPMTQFHAHRWIILALLLGAVAAVAGGVYRLGYRQALDSLAERSAADLALASDRVTTQL 60

Query: 61  SRYESIPHVLSTNPMLANVLNDQQNPKKVQELNLYLEEIQHVTEASDIYLIDALGIAIAA 120
             Y+ +  +++ +P L  +    +   +V    L L E+   T A D++ +D  G  + A
Sbjct: 61  QVYQELAVLMADHPTLKRL---DRAEARVAAQGL-LREVADKTAALDVFFVDRAGRVVVA 116

Query: 121 SNWQQSFSFIGKDYSFRPYYTDAISGNLGRYYAVGTSSDKRGFYFSYPIYQQGAKGILGA 180
           +        +G+D +   Y+  A+ G LG  Y V     +R + ++ P +    + + GA
Sbjct: 117 AE-----GVMGRDVTQTGYFHRAMQGALGTGYGVLQPDGRRAYIYAAPDFDVDGR-VRGA 170

Query: 181 IIVKVDIADIEQQSTSIAMAGQYQFLISDPDDIVFISSVDE---WRLASLTPLTQAKQYA 237
           ++V  D+ D+EQ       A       ++    VFI++  E   W+ ++  P        
Sbjct: 171 LVVVADVEDVEQTWRGSLPA----VFFTNRGGEVFIANRRELLFWQRSAEGPGLSPPDGR 226

Query: 238 LNASKRYAERP--IGELLIKPQYQEDSLSNG-HIYQIRSGNSQAQYMDTHHLMTKAGWRV 294
             A + + E P  I +L   P   E +L    ++ QI                   G   
Sbjct: 227 QVALRSWLEGPHEIWDLRWSPYLPERALHQAVNLPQI-------------------GMVG 267

Query: 295 HILAPMKPLLESMPALMLLSASIYLLLALGLLFSSERRRNLQRMQLAQSLLEQRVEERT- 353
            IL  + P            A+I L L   L+ + ERRR L     A ++LE RV  RT 
Sbjct: 268 EILVDVAPARRLAGLQAAAMAAIVLALGAMLVLAIERRRTLAE---ANTVLESRVAARTR 324

Query: 354 -------------QDLQQANDRLKDTQDELIQAAKLTVIGSLSASINHELNQPLAALRSY 400
                        Q+ Q+A   LK  Q +L+QA KL+ +G +SA I+HELNQPL A++ Y
Sbjct: 325 ALSATNMRLTREVQERQEAEAALKRAQQDLVQAGKLSALGQMSAGISHELNQPLMAIQQY 384

Query: 401 AQNTQTFLARNMPDKASDNLKIIIELTDRLADIVGQFKSFTRKSQGTDSATDLKGCIKQA 460
           A+N + F+AR  P++A +NL  I ++  R+A I+   ++F R         DL   I  A
Sbjct: 385 AENGEAFVARGKPERAGENLGRIAQMAGRMARIIKNLRAFARNESEPMGRVDLGQVIASA 444

Query: 461 LTIVQPEIDKQGVELDVLLPEGQYQVWGDKVRLQQVFVNIMSNAIVAMQQSSKRTLSIRV 520
           + + +P + + G  L    P      WG +VRL QVFVN+++NA  AM +  +R + I +
Sbjct: 445 IELTEPRLRQDGAHLHWQPPAEPVFAWGGEVRLSQVFVNLINNAADAMLEQEQREIRIAI 504

Query: 521 NCAD-----KFCISIQDSGPGVRESQMEKIFEPYFTT---SERTGLGLGLSISQRIIESM 572
                    +  + ++D GPG++E   EKIF+P+++T       G+GLGLSIS  +++S 
Sbjct: 505 ETRHDEGDARLAVIVRDIGPGLKEP--EKIFDPFYSTKAVGSSEGMGLGLSISYGLVQSF 562

Query: 573 QGQINVANAEDG 584
            G I   N  DG
Sbjct: 563 GGHIRGVNTGDG 574