Pairwise Alignments

Query, 603 a.a., ATPase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

Subject, 589 a.a., C4-dicarboxylate transport sensor protein DctB from Phaeobacter inhibens DSM 17395

 Score =  201 bits (512), Expect = 5e-56
 Identities = 150/600 (25%), Positives = 283/600 (47%), Gaps = 44/600 (7%)

Query: 6   PKAKQRLLMTIVLLAGLFAILKLTYWVHFHQGKIEIQQQSERQLKELVSFLDG----ALS 61
           P+++       + L  L A+  +T WV          + +  + +  ++   G     L 
Sbjct: 14  PRSRTTSWRVRLALLVLMAVAAVTVWVTNRALTDRFTESTRNRAELRLALYSGNLVSELG 73

Query: 62  RYESIPHVLSTNPMLANVLNDQQNPKKVQELNLYLEEIQHVTEASDIYLIDALGIAIAAS 121
           R+  +P +L+ +  L + L         Q L  ++EEI     A+ I L+   G  +AA+
Sbjct: 74  RHAIVPQLLARDQALISALQSNDFSLSTQRLISFVEEIG----AASIMLMAQDGRTVAAT 129

Query: 122 NWQQSFSFIGKDYSFRPYYTDAISGNLGRYYAVGTSSDKRGFYFSYPIYQQGAKGILGAI 181
           +  +    +G+ +    Y+ DA+      + A+ T      F +S  I      GILG I
Sbjct: 130 DRNR----LGETHRNAAYFVDALRSKTTVFSAIRTEVGSYRFTYSRRIVD--TSGILGVI 183

Query: 182 IVKVDIADIEQQSTSIAMAGQYQFLISDPDDIVFISSVDEWRLASLTPLTQAKQYALNAS 241
           +V+VD+   E+    I+ A     ++SD    + +++   WR      L++     L   
Sbjct: 184 VVEVDLQKFERAWAGISDA----VMVSDSTGTILLATESRWR-----GLSEEDALQLQTP 234

Query: 242 KRYAERPIGELLIKPQYQEDSLSNGHIYQIRSGNSQAQYMDTHHLMTKAGWRVHILAPMK 301
           +   +R I           D+   G              M     +   GWR+       
Sbjct: 235 EGAIQRAIRATTDWTALPADAYLQGE-----------AVMRLESRIPFQGWRLTSFTTYA 283

Query: 302 PLLESMPALMLLSASIYLLLALGLLFSSERRRNLQRMQLAQ------SLLEQRVEERTQD 355
            + E +  ++ L    + +L L L F +  RR   RM L Q       +L  R++    +
Sbjct: 284 SIRERVNTVLALEIMGFAIL-LALAFYALSRRTALRMALFQRESAELRVLNARLQREIAE 342

Query: 356 LQQANDRLKDTQDELIQAAKLTVIGSLSASINHELNQPLAALRSYAQNTQTFLARNMPDK 415
            ++  + L   +  L Q++KL  +G +SA+++HELNQPLAA+++Y    +  L RN P++
Sbjct: 343 RERMQETLAVAEQSLAQSSKLAALGEMSAAVSHELNQPLAAMKTYLAGARLLLNRNRPEE 402

Query: 416 ASDNLKIIIELTDRLADIVGQFKSFTRKSQGTDSATDLKGCIKQALTIVQPEIDKQGVEL 475
           A  +   I +L +R+  I  Q KS+ RK     S  ++   +  +L++++P++ ++ V++
Sbjct: 403 ALASFGRIDDLIERMGAITRQLKSYARKGGDAFSPVNMGDALASSLSMMEPQLRQRHVKI 462

Query: 476 DVLLPEGQYQVWGDKVRLQQVFVNIMSNAIVAMQQSSKRTLSIRVNCADKFCISIQDSGP 535
             +LPE    V GD++R++QV VN++ NA+ A +  +   + I +   +   +S++D+G 
Sbjct: 463 ARILPEQPVYVMGDRMRIEQVMVNLLRNALDATKSVADPEVEILLAAGETATLSVRDNGM 522

Query: 536 GVRESQMEKIFEPYFTTSE-RTGLGLGLSISQRIIESMQGQINVANAEDGGAIFHIILPI 594
           G+++     +FEP++TT +   G+GLGL+IS  I+  + G++   N ++GGA+F + LPI
Sbjct: 523 GIKD--FGSLFEPFYTTKQPGDGVGLGLAISSGIVNDLGGRLTARNGQNGGAVFEMQLPI 580