Pairwise Alignments

Query, 762 a.a., CheA signal transduction histidine kinases (RefSeq) from Shewanella sp. ANA-3

Subject, 723 a.a., Chemotaxis protein histidine kinase and related kinases from Pseudomonas stutzeri RCH2

 Score =  840 bits (2171), Expect = 0.0
 Identities = 463/762 (60%), Positives = 561/762 (73%), Gaps = 44/762 (5%)

Query: 1   MAFDVDEEILQDFLIEAGEILELLQEQLVALENNPDDTNLLNAIFRGFHTVKGGAGFLSL 60
           M+FD DEEILQDFL+EAGEILELL EQLV LE++PDD  LLNAIFRGFHTVKGGAGFL L
Sbjct: 1   MSFDADEEILQDFLVEAGEILELLSEQLVELESSPDDMALLNAIFRGFHTVKGGAGFLQL 60

Query: 61  TPMVDVCHEAENTFDLLRTGKRSVSAELMDIILQAVDAINTMFAQTQQGEQQDPADPALL 120
             +V+ CH AEN FD+LR G+R V +ELMD++LQA+D++N MF Q ++  +  PA   LL
Sbjct: 61  HELVECCHIAENVFDILRKGERRVDSELMDVVLQALDSVNEMFGQVRERVEPTPASRELL 120

Query: 121 AKLKMLSSGEPLPSESGQSSAEVEPLPEPEPEPEPVIETVFE--VAAVEDMPIEKSELSD 178
           A L  L+     P+ + + +  +EP P  EP+ E V +  FE  +AAV+    E +    
Sbjct: 121 AALARLAE----PASADEPAVPMEPAPVAEPQVEAV-DAEFEQMLAAVQSSDSEPAAAQV 175

Query: 179 SSI-DEIDEAEFEALLDALHGAGKGPGVSAPQADAAPAVQNKPQATSASASDDITDDEFE 237
           S   DEI + EFE+LLD LHG G+    S   A AAP    +P+   A ASD+ITDDEFE
Sbjct: 176 SGGGDEITDDEFESLLDQLHGKGQ---FSVSAASAAP----EPEVVVAPASDEITDDEFE 228

Query: 238 ALLDELHGSGKFKGKVEEPAKPKAEAVAAAPKPAAPAVDSDEITEDEFERLLDELHGKGG 297
           ALLD+LHG GKF+       +P   A AA   PA+    SDEIT+DEFE LLD+LHGKG 
Sbjct: 229 ALLDQLHGKGKFEPVGSTSTEPATPAAAA---PASNTSASDEITDDEFEALLDQLHGKGK 285

Query: 298 APAKVTAKAESAPAKTEPAKAPPSAAAPSTPAAPKASVATPATPPAVKAKTDVAVAEKAP 357
               V   A + P+K EP   P +A A    AAP A+V+ PA            VAEKAP
Sbjct: 286 FEPAVAEVAPAVPSKPEPK--PEAARAAPAKAAPAAAVSKPAA----------VVAEKAP 333

Query: 358 AKAAAAASANVPQGETTVRVDTARLDQIMNMVGELVLVRNRLLSLGISRDDEEMSKALAN 417
           A+A           ETTVRVDTARLD+IMNMVGELVLVRNRL+ LG +  DE M+KA++N
Sbjct: 334 AEA-----------ETTVRVDTARLDEIMNMVGELVLVRNRLVRLGSNSGDEAMAKAVSN 382

Query: 418 LDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARTLNKEIDLVLVGEETDLDKNLVEA 477
           LD+VTADLQ AVMKTRMQPIKKVFGRFPR+VRDLAR+L KEI+L LVGEETDLDKNLVEA
Sbjct: 383 LDVVTADLQSAVMKTRMQPIKKVFGRFPRLVRDLARSLKKEINLELVGEETDLDKNLVEA 442

Query: 478 LADPLVHLVRNSVDHGIEMPNDREASGKPRTGTITLSASQEGDHILLKIEDDGAGMDPEK 537
           LADPLVHLVRN+VDHGIEMP +REA+GKPRTG + LSA QEGDHILL I DDG GMD   
Sbjct: 443 LADPLVHLVRNAVDHGIEMPEEREAAGKPRTGRVVLSAEQEGDHILLIISDDGKGMDANV 502

Query: 538 LKQIAIKRGVLDEDTAARMTDSEAYNLIFAPGFSTKVEISDISGRGVGMDVVKTRITQLN 597
           L+  A+++G+L++D A R++D E YNLIFAPGFSTK EISD+SGRGVGMDVVKT+I+QLN
Sbjct: 503 LRAKAVEKGMLEKDAADRLSDLECYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLN 562

Query: 598 GTVHIDSMKGKGTVLEIKVPLTLAIMPTLMVDVAKQVFALPLSSVNEIFHLDLTKTNIVD 657
           GTV++ S KG+G+ + IKVPLTLAIMPTLMV +  Q FA PL +VNEIFHLDL++TN+VD
Sbjct: 563 GTVNVFSTKGQGSRVVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHLDLSRTNVVD 622

Query: 658 GQLTVIVRNKAVPLFYLEQWLHRNRTNFKHGDKKHGHVVIVQLGMMQIGFVVDALIGQEE 717
           GQ  VIVR+KA+PLFYL++WL ++       +++ GHVVI+ +G   IGFVVD L+GQEE
Sbjct: 623 GQEVVIVRDKALPLFYLKRWLIQSAA---EEEQREGHVVILSVGNQSIGFVVDQLVGQEE 679

Query: 718 VVIKPLGALLHGTPGMAGATITSDGGIALILDVPGLLKHYAK 759
           VVIKPLG +L GTPGM+GATIT DG IALILDVP +LK YA+
Sbjct: 680 VVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSMLKRYAR 721