Pairwise Alignments

Query, 762 a.a., CheA signal transduction histidine kinases (RefSeq) from Shewanella sp. ANA-3

Subject, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  859 bits (2219), Expect = 0.0
 Identities = 479/793 (60%), Positives = 567/793 (71%), Gaps = 48/793 (6%)

Query: 1   MAFDVDEEILQDFLIEAGEILELLQEQLVALENNPDDTNLLNAIFRGFHTVKGGAGFLSL 60
           M++++DE+ILQDFL+EAGEILELL EQLV LENNP+D +LLNAIFRGFHTVKGGAGFL+L
Sbjct: 1   MSYELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLAL 60

Query: 61  TPMVDVCHEAENTFDLLRTGKRSVSAELMDIILQAVDAINTMFAQTQQGEQQDPADPALL 120
           + +V+ CH AEN FD+LR G+R VS  LMD +L+A+D +N  F   Q+ E   PADP LL
Sbjct: 61  SELVETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELL 120

Query: 121 AKLKMLSSGEPLPSESGQSSAEVEPLPEPEPE-PEPVIETVFEVAAVEDMPIEKSELSDS 179
            +L  LS     P+   +  A      EPE E  E +IE V E    E +P  ++E++ S
Sbjct: 121 DELHRLSK----PASEDEDEAAEAHFDEPEEELVEEIIEEVVEDVVEEAVPNVETEVTAS 176

Query: 180 ---------SIDEIDEAEFEALLDALHGAGKGPGVSAPQADAAPAVQNKPQATSASASDD 230
                    SID+I+E EFE LLD LHG GK PG  +PQA A+ A       T++  + D
Sbjct: 177 ASSGVIDKGSIDDINEDEFEKLLDELHGKGKAPGAQSPQAPAS-APAKAASVTNSDLNGD 235

Query: 231 ITDDEFEALLDELHGSGKFKG----KVEEPAKPKAEAVAAAPKPAA----PAVDSDEITE 282
           ITDDEFE LLD+LHG GK           P  P        PKPAA    P  D D +T+
Sbjct: 236 ITDDEFEKLLDQLHGKGKGPSIETAAPAAPVTPSTPKATETPKPAAAKSAPGGD-DLMTD 294

Query: 283 DEFERLLDELHGKGGAPAKVTAKAESAPAKTEP----AKAPPSAAAPSTPAAPKASVATP 338
           +EFE+LLDELHG G  P+    +  + P  + P    AKA   A+APST  A K      
Sbjct: 295 EEFEKLLDELHGSGKGPSVEELEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPA 354

Query: 339 ATPPAVKAKTDVAVAEKAPAKAA-----------AAASANVPQGETTVRVDTARLDQIMN 387
           A  PAV AK + A   KAPA AA           AA  A   Q E+TVRVDT+ LD IMN
Sbjct: 355 AAKPAV-AKEEPA---KAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMN 410

Query: 388 MVGELVLVRNRLLSLGISRDDEEMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRV 447
           MVGELVLVRNRLLSLG++ +DEEMSKA+ANLD+VTADLQGAVMKTRMQPIKKVFGRFPRV
Sbjct: 411 MVGELVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRV 470

Query: 448 VRDLARTLNKEIDLVLVGEETDLDKNLVEALADPLVHLVRNSVDHGIEMPNDREASGKPR 507
           VRDLAR+LNKEIDL L GEETDLDKNLVEALADPL+HLVRNSVDHGIEMP++R  +GK R
Sbjct: 471 VRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSR 530

Query: 508 TGTITLSASQEGDHILLKIEDDGAGMDPEKLKQIAIKRGVLDEDTAARMTDSEAYNLIFA 567
           TG + LSASQEGDHI L I DDGAGMDP+KL+ IA+KRG++DED A R+T+ E +NLIF 
Sbjct: 531 TGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFM 590

Query: 568 PGFSTKVEISDISGRGVGMDVVKTRITQLNGTVHIDSMKGKGTVLEIKVPLTLAIMPTLM 627
           PGFS+K +I+DISGRGVGMDVVKT I  LNG++ IDS  GKGT + IKVPLTLAI+PTLM
Sbjct: 591 PGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLM 650

Query: 628 VDVAKQVFALPLSSVNEIFHLDLTKTNIVDGQLTVIVRNKAVPLFYLEQWL--HRNRTNF 685
           V VA   FALPL+SVNEIFHLDL +TN+VDGQLT+IVR K++PLFYL+ WL   + +   
Sbjct: 651 VGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGKVQL 710

Query: 686 KHGDKKHGHVVIVQLGMMQIGFVVDALIGQEEVVIKPLGALLHGTPGMAGATITSDGGIA 745
           + G   HGHVVIVQ+G  ++G VVD LIGQEEVVIKPL  LL GTPGM+GATITSDG IA
Sbjct: 711 RQG---HGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIA 767

Query: 746 LILDVPGLLKHYA 758
           LILDVP LLK YA
Sbjct: 768 LILDVPDLLKQYA 780