Pairwise Alignments

Query, 762 a.a., CheA signal transduction histidine kinases (RefSeq) from Shewanella sp. ANA-3

Subject, 862 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

 Score =  293 bits (751), Expect = 2e-83
 Identities = 168/519 (32%), Positives = 284/519 (54%), Gaps = 25/519 (4%)

Query: 259 PKAEAVAAAPKPAAPAVDSDEITEDEFERLLDELHGKGGAPAKVTAKAESAPAKTEPAKA 318
           P A   AA+ + +A A+ +  ++  + +R++ E+    G P ++ + A +       A  
Sbjct: 344 PPAGTGAASARSSA-ALSATILSILDGQRVILEMPRDEGLPGRLASVARTVDNVLRAAGH 402

Query: 319 PPSAAAPSTPAAPKASVATPATP-PAVKAKTDVAVAEKAPAKAAAAASANVPQG------ 371
             +    +T AA ++  A P     A   +T     E A   A+    A  P+G      
Sbjct: 403 DTAPWTGATAAAGQSGSAAPMLAFLAALFETSETTNETASETASETVGAPPPEGGEALGP 462

Query: 372 --------ETTVRVDTARLDQIMNMVGELVLVRNRLLSLGISRDD--------EEMSKAL 415
                      ++VD A++D +M ++GELV+ +N L  L    ++         E+    
Sbjct: 463 VLADQRPANRVLKVDQAKIDTLMALIGELVVSKNSLPFLARRAEEVHGSREMGREIKDTF 522

Query: 416 ANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARTLNKEIDLVLVGEETDLDKNLV 475
           A +D +  ++Q A+M  RM P+ +VF RFPR+VRD+AR L K IDLV+ GE+T  DK +V
Sbjct: 523 AVVDRLAQEMQAAIMAVRMLPVSEVFERFPRLVRDIARKLGKHIDLVIEGEDTAADKTIV 582

Query: 476 EALADPLVHLVRNSVDHGIEMPNDREASGKPRTGTITLSASQEGDHILLKIEDDGAGMDP 535
           E L DPL+H++RNS+DHGIE P +REA+GKP T  + + A  + D +++++ DDG G+DP
Sbjct: 583 EMLGDPLLHIIRNSLDHGIESPEEREAAGKPPTARVLVKAFHDSDQVVIEVSDDGRGIDP 642

Query: 536 EKLKQIAIKRGVLDEDTAARMTDSEAYNLIFAPGFSTKVEISDISGRGVGMDVVKTRITQ 595
            K++  A+ +GV++ + AAR++D EA NL+F PGFST  ++SD+SGRGVGMDVV + + +
Sbjct: 643 VKIRAAAVAKGVIEAERAARLSDQEAVNLVFLPGFSTAGQVSDLSGRGVGMDVVVSTMDK 702

Query: 596 LNGTVHIDSMKGKGTVLEIKVPLTLAIMPTLMVDV-AKQVFALPLSSVNEIFHLDLTKTN 654
            NG V + S  G GT + + +PL++A+   +MV+     +F +P+  + +   +      
Sbjct: 703 ANGVVSLSSTPGLGTTVRLSLPLSMAVTRVMMVEAGGGMLFGIPMDHIAQTVRIPRKAVR 762

Query: 655 IVDGQLTVIVRNKAVPLFYLEQWLHRNRTNFKHGDKKHGHVVIVQLGMMQIGFVVDALIG 714
            +      ++R+  VPL  L+  L      +   + +   V++V++G    G VVD    
Sbjct: 763 RIKQSEAFVLRDAIVPLVRLDTLLGLAPPVWFGDESQEDAVLVVRVGNALTGLVVDHFRE 822

Query: 715 QEEVVIKPLGALLHGTPGMAGATITSDGGIALILDVPGL 753
             ++++KP   +L G PG +G  +  DG + L+L++  L
Sbjct: 823 GMDIILKPFDGILAGLPGYSGTALLGDGRVLLVLNLKEL 861



 Score = 74.3 bits (181), Expect = 2e-17
 Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 8/149 (5%)

Query: 9   ILQDFLIEAGEILELLQEQLVALENNPDDTNLLNAIFRGFHTVKGGAGFLSLTPMVDVCH 68
           +L  FL EA ++L+     L+ALE  P D   LN +FR  HT+KG  G         + H
Sbjct: 5   LLLRFLSEARDLLQTAASGLLALEKTPGDDAALNEVFRSVHTLKGSVGLFDYPAFTKLVH 64

Query: 69  EAENTFDLLRTGKRSVSAELMDIILQAVDAINT-MFAQTQQGEQQDPADPALLAKLKMLS 127
             E+    +R G+ ++++EL+D++L  +D +   + A  + G   D A+   LA    L 
Sbjct: 65  AGEDVLSAVRAGQVALTSELVDLLLDTLDQVGAWVDAIERSGLLPDGAEGLSLALTTSLR 124

Query: 128 SGEPLPSESGQSSAEVEPLPEPEPEPEPV 156
           +   LP E G      EP   PEP   PV
Sbjct: 125 A--TLPREHG-----AEPTSAPEPTEAPV 146