Pairwise Alignments

Query, 762 a.a., CheA signal transduction histidine kinases (RefSeq) from Shewanella sp. ANA-3

Subject, 693 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

 Score =  285 bits (728), Expect = 7e-81
 Identities = 159/388 (40%), Positives = 230/388 (59%), Gaps = 7/388 (1%)

Query: 368 VPQGETTVRVDTARLDQIMNMVGELVLVRNRLLSLGISRDDEEMSKALANLDLVTADLQG 427
           V +G  ++RV   RLD++M+ VGELV+ ++RL  +  S +D ++      ++ +  +L+ 
Sbjct: 300 VAKGADSIRVPAERLDELMDRVGELVIAQSRLTQVAASINDMQVKAIAEEIERLAHELRD 359

Query: 428 AVMKTRMQPIKKVFGRFPRVVRDLARTLNKEIDLVLVGEETDLDKNLVEALADPLVHLVR 487
             M  RM PI  +FGRF R+V DLA  L K+I+L   GEET+LDK ++E L DPL+HL+R
Sbjct: 360 TTMGVRMVPISSLFGRFRRLVHDLAHDLGKQIELTTFGEETELDKTVIERLNDPLIHLIR 419

Query: 488 NSVDHGIEMPNDREASGKPRTGTITLSASQEGDHILLKIEDDGAGMDPEKLKQIAIKRGV 547
           NS+DHG+E P  R+ +GKP  G ITLSA   G  +L+ I DDG G+D  +++  A ++G+
Sbjct: 420 NSIDHGLETPEGRKEAGKPPAGRITLSARHSGAEVLVSIIDDGRGLDRARIQARAEEQGL 479

Query: 548 LDEDTAARMTDSEAYNLIFAPGFSTKVEISDISGRGVGMDVVKTRITQLNGTVHIDSMKG 607
           L      +++D++ + +IF  GFST   ++ +SGRGVGMDVVK  I  L G + I S  G
Sbjct: 480 L--APGVKLSDNDLFQVIFQAGFSTAKVVTSLSGRGVGMDVVKRTIEGLRGKIDIASTPG 537

Query: 608 KGTVLEIKVPLTLAIMPTLMVDVAKQVFALPLSSVNEIFHLDLTKTNIVDGQLTVIVRNK 667
           KGT L +++PLTLAI+  L+V V K  + LPLS+V E   L   +     G+  + +R  
Sbjct: 538 KGTELTLRLPLTLAIIDGLLVRVGKARYVLPLSAVEECVELSAEEDGRSRGRSFLNIRGD 597

Query: 668 AVPLFYLEQWLHRNRTNFKHGDKKHGHVVIVQLGMMQIGFVVDALIGQEEVVIKPLGALL 727
            VP   L     R           +  VVIV  G  ++G VVD +IG  + VIK L  L 
Sbjct: 598 LVPFLRL-----RELFQVSAPADPYQKVVIVSSGEFRVGLVVDQVIGNHQTVIKSLSKLH 652

Query: 728 HGTPGMAGATITSDGGIALILDVPGLLK 755
                 +GATI  DG +ALILD+  L+K
Sbjct: 653 ADVETFSGATILGDGAVALILDIGHLVK 680



 Score = 79.3 bits (194), Expect = 6e-19
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 2/139 (1%)

Query: 11  QDFLIEAGEILELLQEQLVALENNPDDTNLLNAIFRGFHTVKGGAGFLSLTPMVDVCHEA 70
           + F  EA E+LE L++ L+ LE+ PDD +L+++ FR  HT+KG         +    H  
Sbjct: 8   ETFRQEAQELLEQLEQALLDLEHAPDDGDLIDSAFRALHTIKGSGSMFGFDAVAAFTHHV 67

Query: 71  ENTFDLLRTGKRSVSAELMDIILQAVDAINTMFAQTQQGEQQDPADPALLAKLKMLSSGE 130
           E  FDL+R GK + S EL+ + L A D +  +  Q +  E  +    A+L  LK +    
Sbjct: 68  ETAFDLVRKGKVTPSRELIAVALAAKDRMRLLIEQPETPESAE--GDAILRDLKAIVDAS 125

Query: 131 PLPSESGQSSAEVEPLPEP 149
            LPS      A V    +P
Sbjct: 126 DLPSAGEGGDAPVAAREQP 144