Pairwise Alignments

Query, 275 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

Subject, 280 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2C3

 Score =  223 bits (568), Expect = 4e-63
 Identities = 116/257 (45%), Positives = 165/257 (64%), Gaps = 1/257 (0%)

Query: 14  LVMTYGLKILFALIIFFVGKYFSGVAQKLVRKVLNSRKIDPTVVSFVANLAWAVVFVFTI 73
           ++M YG ++L A+I   +G +      + +  +L  R  D  +  F++ LA  ++ +  I
Sbjct: 20  MIMEYGSRVLLAVITLAIGWWLINKVTQKLGALLALRNADLALQGFISTLANIILKILLI 79

Query: 74  IATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYIEAAGIA 133
           ++    IGV+T S VA IGAAGLA+GLALQGSL+NFA GVL++LFRP R+GD+IEA G+A
Sbjct: 80  VSVASMIGVETTSFVAAIGAAGLAIGLALQGSLANFAGGVLILLFRPFRIGDWIEAQGVA 139

Query: 134 GTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLVIGVSYSADIAQTK 193
           GTVD I IF T LRT DNK ++ PN ++ NG ITN +    R++   +GV Y AD+ + +
Sbjct: 140 GTVDSIQIFHTVLRTGDNKTVIVPNGNLSNGIITNTNRQPTRKVVFDVGVDYQADLQKAR 199

Query: 194 KVLTEILDNNQYVLKEPGYTIGLSELANSSINFVVRPWVKTADYWTARFQILEQIKNALD 253
           +VL E L  ++ VL +P     +S L +SSI   +R WVKTADYW+  F + EQ ++ L 
Sbjct: 200 EVLLE-LAKDERVLADPAPEAVISTLGDSSITVSLRIWVKTADYWSVMFMLNEQARDRLK 258

Query: 254 AANIEIPFPQMDIHVKQ 270
            A I+IPFPQ  I V Q
Sbjct: 259 EAGIDIPFPQRVIRVVQ 275