Pairwise Alignments

Query, 275 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

Subject, 295 a.a., small-conductance mechanosensitive channel MscS from Rahnella sp. WP5

 Score =  250 bits (639), Expect = 2e-71
 Identities = 126/258 (48%), Positives = 173/258 (67%)

Query: 14  LVMTYGLKILFALIIFFVGKYFSGVAQKLVRKVLNSRKIDPTVVSFVANLAWAVVFVFTI 73
           L++ Y + I+ A+ I  VG   + V    V +VL  R ID TV  F++ +    +  FT+
Sbjct: 23  LLLHYAVNIVAAIFILIVGMIIARVVSGAVSRVLKVRGIDITVSDFLSAMVRYAIIAFTL 82

Query: 74  IATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYIEAAGIA 133
           IA LG+IGVQT S++AVIGAAGLAVGLALQGSLSNFA+GVL+V+FRP R G+Y++  G+A
Sbjct: 83  IAVLGRIGVQTTSVIAVIGAAGLAVGLALQGSLSNFAAGVLLVIFRPFRAGEYVDLGGVA 142

Query: 134 GTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLVIGVSYSADIAQTK 193
           GTV ++ IFST LRTPDNK+IV PN  I+ G I N S     RI+L +GV Y +DI   K
Sbjct: 143 GTVTQVQIFSTTLRTPDNKIIVVPNGKIIAGNIINNSREPTSRIELTVGVGYDSDIDLVK 202

Query: 194 KVLTEILDNNQYVLKEPGYTIGLSELANSSINFVVRPWVKTADYWTARFQILEQIKNALD 253
            +LT+I+  +Q VLK+    + L+E+A S++NF+V  W    D    ++ +LE  K ALD
Sbjct: 203 TILTDIITADQRVLKDKDVVVRLNEMAASTLNFIVYAWTSNGDAQNVKWDLLESFKRALD 262

Query: 254 AANIEIPFPQMDIHVKQL 271
             NI I +PQMD+H+ Q+
Sbjct: 263 KNNINIAYPQMDVHLYQV 280