Pairwise Alignments

Query, 275 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

Subject, 303 a.a., putative transport protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  216 bits (549), Expect = 6e-61
 Identities = 102/267 (38%), Positives = 169/267 (63%)

Query: 1   MENLEGLLKQAPDLVMTYGLKILFALIIFFVGKYFSGVAQKLVRKVLNSRKIDPTVVSFV 60
           ++ L  + +Q  D  +  G +IL A ++F VG++   +  + V ++++ RK+D ++ +FV
Sbjct: 34  LDKLSLITQQLVDFGIRAGERILIATLVFIVGRFLISMLNRFVGRLMDRRKVDISIKTFV 93

Query: 61  ANLAWAVVFVFTIIATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRP 120
            +L   ++ +  II+ +G +GV+T S  A++ +AG+AVG+AL G+L NFA G++++LF+P
Sbjct: 94  KSLVNILLTILLIISVVGALGVETTSFAALLASAGVAVGMALSGNLQNFAGGLIVLLFKP 153

Query: 121 CRVGDYIEAAGIAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLV 180
            +VGD+IE+ G++GTV EI IF T L T DNKVI  PN ++ +G +TNY+    RR++ +
Sbjct: 154 YKVGDWIESQGVSGTVKEIQIFHTILTTGDNKVIYIPNGAMSSGVVTNYNTQTTRRVEWI 213

Query: 181 IGVSYSADIAQTKKVLTEILDNNQYVLKEPGYTIGLSELANSSINFVVRPWVKTADYWTA 240
           +GV Y  D  + ++++ +IL  +  +L +P   I L  L  SS+N V R WV TADYW  
Sbjct: 214 VGVDYGEDYNKVQQIVRDILTADNRILTDPAPFIALHALDASSVNVVARVWVNTADYWGV 273

Query: 241 RFQILEQIKNALDAANIEIPFPQMDIH 267
            F I + I    +   I  PFPQ+ +H
Sbjct: 274 YFDINKTIYETFNEKGINFPFPQLTVH 300