Pairwise Alignments

Query, 409 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

Subject, 622 a.a., DEAD/DEAH box helicase from Pseudomonas fluorescens FW300-N2C3

 Score =  355 bits (910), Expect = e-102
 Identities = 187/405 (46%), Positives = 258/405 (63%), Gaps = 5/405 (1%)

Query: 1   MSFSALSLHSQLVNTLAELGYQQPTPIQIEAIPAILAKQDVMAGAQTGTGKTAAFALPIL 60
           MSF++L L   LV  +   GY QPTP+Q  AIPA+L  +D+M  AQTGTGKT  FALPIL
Sbjct: 1   MSFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query: 61  QQLLI----DNESQDAPKDVRALVLVPTRELAVQVQQSFVKYAKGTDIRVGIAYGGVSIE 116
           ++L      D   +  P+  R LVL PTRELA QV +SF  YA+         +GGV + 
Sbjct: 61  ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKVYARDLKFVSACIFGGVGMN 120

Query: 117 AQQAEFKAGIDVLIATPGRLLDHLRQGALNLKRLSVLVFDEADRMLDMGFMDEIKAVLKQ 176
            Q      G+DVL+A PGRLLD   QG+++L  + +LV DEADRMLDMGF+ ++K VL +
Sbjct: 121 PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180

Query: 177 VPAQRQTLLFSATLDDSIFGFSKNLLRDPKLIEVAKRNTTAAQVEQRVYAIDSDRKTEFV 236
           +PA+RQ LLFSAT    I   +  LL +P+ IEV   NTT  ++EQRV+ + +  K   +
Sbjct: 181 LPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAASHKRALL 240

Query: 237 SHLVRSKNWQQVLIFSRTKQGVDKLTTQLNQLGVATQAFHGDLSQGAREKVLKDFKQGLV 296
           +HL+ +  W+QVL+F+RTK G ++L   L++ G+   A HG+ SQ AR K L DFK G V
Sbjct: 241 AHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLPAVAIHGNKSQNARTKALADFKAGEV 300

Query: 297 QVLVATDVAARGLDIADLQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALL 356
           ++LVATD+AARGLDI  L +V+NFELP + EDY+HRIGRTGRAG +G AI+L + ++  L
Sbjct: 301 RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360

Query: 357 LEEVEALLDKRLPQQWYPGFEPDFNKME-PEPRRNSKAAQKQRAK 400
           L+ +E +  +++      GF+    + E PE R        + A+
Sbjct: 361 LKSIERMTKQKIADGDLMGFDASTIEAEKPEVRERPDVRNPRNAR 405