Pairwise Alignments

Query, 409 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

Subject, 639 a.a., DEAD/DEAH box helicase from Pseudomonas aeruginosa PA14

 Score =  358 bits (919), Expect = e-103
 Identities = 193/411 (46%), Positives = 262/411 (63%), Gaps = 12/411 (2%)

Query: 1   MSFSALSLHSQLVNTLAELGYQQPTPIQIEAIPAILAKQDVMAGAQTGTGKTAAFALPIL 60
           MSFS+L L   L   +   GY QPTP+Q  AIPA+L  +D+M  AQTGTGKT  FALP+L
Sbjct: 1   MSFSSLGLSEALARAVEAAGYSQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPVL 60

Query: 61  QQLLI----DNESQDAPKDVRALVLVPTRELAVQVQQSFVKYAKGTDIRVGIAYGGVSIE 116
           ++L      D E +  P+  R LVL PTRELA QV  SF  YA+   +     +GGV + 
Sbjct: 61  ERLFPAGHPDREHRHGPRQARVLVLTPTRELAAQVHDSFKVYARDLPLNSTCIFGGVGMN 120

Query: 117 AQQAEFKAGIDVLIATPGRLLDHLRQGALNLKRLSVLVFDEADRMLDMGFMDEIKAVLKQ 176
            Q      G+DVL+A PGRLLD   Q  ++L  + +LV DEADRMLDMGF+ ++K VL +
Sbjct: 121 PQIQALAKGVDVLVACPGRLLDLAGQNKVDLSHVEILVLDEADRMLDMGFIHDVKKVLAK 180

Query: 177 VPAQRQTLLFSATLDDSIFGFSKNLLRDPKLIEVAKRNTTAAQVEQRVYAIDSDRKTEFV 236
           +P +RQ LLFSAT    I   +  LL +P+ IEV   NTT  ++EQRV+ + + +K   +
Sbjct: 181 LPPKRQNLLFSATFSKDIVDLANKLLHNPERIEVTPPNTTVERIEQRVFRLPAPQKRALL 240

Query: 237 SHLVRSKNWQQVLIFSRTKQGVDKLTTQLNQLGVATQAFHGDLSQGAREKVLKDFKQGLV 296
           +HLV    W+QVL+F+RTK G ++L   L + G+   A HG+ SQ AR K L DFK   V
Sbjct: 241 AHLVTVGAWEQVLVFTRTKHGANRLAEYLTKHGLPAAAIHGNKSQNARTKALADFKANDV 300

Query: 297 QVLVATDVAARGLDIADLQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALL 356
           ++LVATD+AARGLDI  L +V+N+ELP + EDY+HRIGRTGRAG +G AI+L + ++  L
Sbjct: 301 RILVATDIAARGLDIDQLPHVVNYELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360

Query: 357 LEEVEALLDKRLPQQWYPGFEPDF---NKMEPEPRRNSKAAQKQ--RAKKR 402
           L+ +E +  +R+P     GF+P+       +PEPR   +A QKQ  R K+R
Sbjct: 361 LKAIEKMTRQRIPDGDAQGFDPEAVLPEVAQPEPR---EAPQKQPRRDKER 408