Pairwise Alignments

Query, 291 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

Subject, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 18/221 (8%)

Query: 44  WPPYAWEDPQGEAQGLDVELLRAFAEHLGCEVTFINVPAKRSHQMLKSGSLDMMMGATKT 103
           WPP+  E+ Q   +GL V+++ A     G  V F  +P  R+   +K G +D++     T
Sbjct: 30  WPPFVMENAQ--QKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFT 87

Query: 104 AEREEYALFSAAYRDETVRLFVLDENKDKIRLTQWQDIFSQKLRLLVPISGW-YGVDYER 162
            ER  Y  +S  Y    V+   + +  D         +  +K+ +   + G+ YG ++  
Sbjct: 88  QERTAYLTYSDNYLTNQVKF--IKKAGDNFEFAGLASLNGKKVGI---VRGYGYGDEFMN 142

Query: 163 TRQRLEQEHLLILSPDADKSVQMLTYGRADLIIGDAMAMPYIASQHQGVRLSPL---KPV 219
                  E     S D  +++Q L  GR DL + D +    I ++  G+ L+        
Sbjct: 143 DPSFFRPE-----STDLKQNLQKLQAGRIDLAVEDELVAKSIITE-AGMNLADFAFTNQA 196

Query: 220 LDRNQIHLMLSKQTLSSAQL-KQFNAAIKALSTNGEIARIV 259
           +  N +H+   K    S +L   FN  +  +  NG   +++
Sbjct: 197 ISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLL 237