Pairwise Alignments

Query, 357 a.a., recombinase A (RefSeq) from Shewanella sp. ANA-3

Subject, 347 a.a., protein RecA from Pseudomonas stutzeri RCH2

 Score =  491 bits (1265), Expect = e-144
 Identities = 243/327 (74%), Positives = 286/327 (87%)

Query: 3   VDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
           +D NK++ALAA L QIEKQFGKG++M++G+     +  ISTGSL LD+ALG GGLP GRI
Sbjct: 1   MDENKKRALAAALGQIEKQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRI 60

Query: 63  VEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
           VEIYGPESSGKTTLTL VIA AQ+ G TCAF+DAEHALDP YA KLGV++D+LL SQPDT
Sbjct: 61  VEIYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDT 120

Query: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
           GEQALEI D L RS AVDVIIVDSVAAL PKAEIEGE+GD+H+GL AR+MSQA+RK+ GN
Sbjct: 121 GEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGN 180

Query: 183 LKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE 242
           +K +N L+IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRRTGA+KEGDEVVG+E
Sbjct: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240

Query: 243 TRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQG 302
           TRVKVVKNKVA PF+QAEFQILYG+GI R+GE++DLGV   L+EK+GAWY+YKG+KIGQG
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYRSGEVIDLGVQQGLVEKSGAWYAYKGNKIGQG 300

Query: 303 RANAGKYLTENPAIAAEIDKTLRELLL 329
           +ANA K+L +NP I  EI++ +R+ LL
Sbjct: 301 KANAAKFLEDNPEIGREIEQQIRDKLL 327