Pairwise Alignments

Query, 357 a.a., recombinase A (RefSeq) from Shewanella sp. ANA-3

Subject, 363 a.a., recombinase RecA from Rhodopseudomonas palustris CGA009

 Score =  456 bits (1174), Expect = e-133
 Identities = 226/344 (65%), Positives = 284/344 (82%), Gaps = 3/344 (0%)

Query: 6   NKEKALAAVLSQIEKQFGKGSIMKLGE-DRSMDVETISTGSLSLDVALGAGGLPMGRIVE 64
           +K KAL+A LSQIE+QFGKGS+M+LG+ DRSMD+ETIS+GSL LD+ALG GGLP GRIVE
Sbjct: 16  DKSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIVE 75

Query: 65  IYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
           IYGPESSGKTTL L  +A AQ++G  CAF+DAEHALDP+YA+KLGV++D+LL SQPD GE
Sbjct: 76  IYGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHGE 135

Query: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
           QALEI D L RSGA+DV+IVDSVAAL P+AE+EGE+GD+  GL AR+MSQA+RKL  ++ 
Sbjct: 136 QALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASIN 195

Query: 185 QSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNETR 244
           +SNT++IFINQIRMKIGVM+G+PETTTGGNALKFYASVRLDIRR G IKE DEVVGN+TR
Sbjct: 196 KSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGQIKERDEVVGNQTR 255

Query: 245 VKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGRA 304
           VKVVKNK+A PFKQ EF I+YG+G+++ GE++DLGV   ++EK+GAW+S+   ++GQGR 
Sbjct: 256 VKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSHDSQRLGQGRE 315

Query: 305 NAGKYLTENPAIAAEIDKTLREL--LLSNPSAMSSSSSDDENSE 346
           NA  +L  NP + A+I+  +R+   L++      S  SD +  E
Sbjct: 316 NAKAFLKANPDMTAKIEAAIRQNSGLIAEQILAGSPESDADGEE 359