Pairwise Alignments

Query, 357 a.a., recombinase A (RefSeq) from Shewanella sp. ANA-3

Subject, 356 a.a., RecA protein from Caulobacter crescentus NA1000

 Score =  447 bits (1149), Expect = e-130
 Identities = 219/339 (64%), Positives = 276/339 (81%), Gaps = 8/339 (2%)

Query: 2   KVDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGR 61
           K + +K++AL A L+QI++ FGKGS+MKLGE   +++E++STGSL LD+ALG GGLP GR
Sbjct: 12  KEEGDKQRALEAALAQIDRAFGKGSVMKLGEKGKVEIESVSTGSLGLDIALGIGGLPKGR 71

Query: 62  IVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPD 121
           IVE+YGPESSGKTTL L V+A  Q+ G T AF+DAEHALDP YA KLGV++DNLL SQPD
Sbjct: 72  IVEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPD 131

Query: 122 TGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
            GEQALEI D L RSGAVD+++VDSVAALTPKAEIEGE+GDS  GL AR+MSQA+RKL  
Sbjct: 132 NGEQALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTA 191

Query: 182 NLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGN 241
           ++ ++NT++IFINQIR KIGVM+G+PETTTGGNALKFYASVRLDIRRTG++K  DE+VGN
Sbjct: 192 SINKANTIVIFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTGSVKARDEIVGN 251

Query: 242 ETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQ 301
             RVKVVKNKVA PF++ EF I+YG+GI++ GE++DLGV   +I+KAG+W+SY   +IGQ
Sbjct: 252 NVRVKVVKNKVAPPFREVEFDIMYGEGISKLGEVIDLGVKAGIIDKAGSWFSYGSQRIGQ 311

Query: 302 GRANAGKYLTENPAIAAEIDKTLR--------ELLLSNP 332
           GR N  ++L  NP +AA+I+K +R        ELL+  P
Sbjct: 312 GRDNVREFLKNNPDVAADIEKAVRKSSQKIEEELLVGGP 350