Pairwise Alignments

Query, 861 a.a., DNA mismatch repair protein MutS (RefSeq) from Shewanella sp. ANA-3

Subject, 854 a.a., DNA mismatch repair protein MutS (RefSeq) from Shewanella amazonensis SB2B

 Score = 1352 bits (3500), Expect = 0.0
 Identities = 690/860 (80%), Positives = 761/860 (88%), Gaps = 7/860 (0%)

Query: 1   MNPIDTDDLEKHTPMMRQYLTMKAEHHDMLLFYRMGDFYELFYDDAKRASELLGISLTAR 60
           MN  D  DLEKHTPMMRQYLTMKA H DMLLFYRMGDFYELFYDDAKRASE+L ISLTAR
Sbjct: 1   MNSTDLLDLEKHTPMMRQYLTMKAAHPDMLLFYRMGDFYELFYDDAKRASEMLSISLTAR 60

Query: 61  GKSGGDPIPMAGIPYHAVEGYLAKLVQIGQSVAICEQIGDPATSKGPVERKVVRIVTPGT 120
           GKSGGDPIPMAGIPYHAVEGYLAKLVQ+GQSVAICEQIGDPAT+KGPVERKVVR+VTPGT
Sbjct: 61  GKSGGDPIPMAGIPYHAVEGYLAKLVQLGQSVAICEQIGDPATAKGPVERKVVRVVTPGT 120

Query: 121 LTDEALLQERQDNLLAAVYQGKVGFGYATLDVSSGRFVIAELETKESLEAELQRTNPVEI 180
           LTDEALLQERQDNLLAAVYQGKVG+G+ATLDV+SGRFVIAEL ++E+LEAELQRT+P E+
Sbjct: 121 LTDEALLQERQDNLLAAVYQGKVGYGFATLDVASGRFVIAELPSREALEAELQRTSPAEL 180

Query: 181 LYSEDFGAMELLHHFKGKRRRPEWEFDYDTSIKLLLAQFGTKDLHGFGITDARLSLQAAG 240
           LYSEDFG M L++H +GKRRRPEWEFDYDT IK+LL QFGT+DL GFGI DARLSLQAAG
Sbjct: 181 LYSEDFGDMGLINHIRGKRRRPEWEFDYDTCIKMLLEQFGTRDLRGFGIADARLSLQAAG 240

Query: 241 CLMQYVKDTQRTALPHINAITRFNQTDTIVLDAATRRNLELTQNLSGGRDNTLAAVLDNT 300
           CLMQYVKDTQRTALPHIN+I RFNQ D+I+LDAATRRNLELT +LSG R+NTLA+VLDNT
Sbjct: 241 CLMQYVKDTQRTALPHINSIVRFNQGDSIILDAATRRNLELTVSLSGSRENTLASVLDNT 300

Query: 301 ATAMGSRMLQRWIHQPLRDHAQIFARQTAVNELLETTAHESLHDQLKALGDIERIMARLA 360
            TAMGSRMLQRWIHQPLR H  I  RQ AV ELLET  +E L  +LKALGDIERI+ARLA
Sbjct: 301 VTAMGSRMLQRWIHQPLRCHDTIRGRQQAVQELLETGLYEDLRAELKALGDIERILARLA 360

Query: 361 LRTARPRDFARLRQALNLLPQLQQSLAQLSAPHTVKLGQLLGEFPEEQQLLERAIVDNPP 420
           LR+ARPRDFARLR AL +LP +++ L +  A H   L  LLG+FPEE +LL RAIVDNPP
Sbjct: 361 LRSARPRDFARLRDALGILPLIRERLQRCDARHLKSLNILLGDFPEEYELLCRAIVDNPP 420

Query: 421 MLIRDGGVIREGYNAELDEWRGLSEGATDYLVQLEAREKERTGIATLKVGYNRVHGYYIE 480
           +LIRDGGVIREGY++ELDEWR LS+G  DYL Q+E REKERTGIATLKVG+NRVHGYYIE
Sbjct: 421 VLIRDGGVIREGYDSELDEWRKLSDGGIDYLEQMELREKERTGIATLKVGFNRVHGYYIE 480

Query: 481 VSRLQSQQVPLNYQRRQTLKNMERYITPELKEYEEKVLSSQGKALALEKQLWDELFDLIL 540
           VSR QS  VP+ YQRRQTLKN ERYITPELKEYEEKVLSSQGKALALEKQLW+ELFDLIL
Sbjct: 481 VSRAQSALVPIAYQRRQTLKNTERYITPELKEYEEKVLSSQGKALALEKQLWEELFDLIL 540

Query: 541 PKLHELQAFARAAAELDVLSNFAERAETLGYTCPELSSEIGVKIEAGRHPVVERVSQTPF 600
           PKL ELQ FA AA+ELDVL+NFA+RA+   Y CPELS   G+ IEAGRHPVVERVSQ+PF
Sbjct: 541 PKLQELQDFALAASELDVLANFADRADLFNYHCPELSDTTGILIEAGRHPVVERVSQSPF 600

Query: 601 IANPVTLHNQRRMLIVTGPNMGGKSTYMRQVALITLMAHIGCFVPADRAIIGPIDRIFTR 660
           I NPV L N RRMLIVTGPNMGGKSTYMRQVALITLMAHIG FVPA+RA+IGP+DRIFTR
Sbjct: 601 IPNPVELSNHRRMLIVTGPNMGGKSTYMRQVALITLMAHIGSFVPAERALIGPVDRIFTR 660

Query: 661 IGASDDLASGRSTFMVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLSLAWSAAEYLA 720
           IGASDDLASGRSTFMVEMTETANILHNATA SLVLMDEIGRGTSTYDG+SLAWSAAEYLA
Sbjct: 661 IGASDDLASGRSTFMVEMTETANILHNATANSLVLMDEIGRGTSTYDGMSLAWSAAEYLA 720

Query: 721 QQVGAMTLFATHYFELTQLPELMAGVYNVHLDAIEHEDTIAFMHAVQEGAASKSYGLQVA 780
           Q++GAMTLFATHYFELTQLPE++ GV+NVHLDAIEH+DTIAFMHAVQEGAASKSYGLQVA
Sbjct: 721 QKLGAMTLFATHYFELTQLPEMLPGVHNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVA 780

Query: 781 ALAGVPARVIKAAKHKLHQLESRDHQVEGANVNGTRAPIQTLLALPEPVENPAVSKLKDI 840
           ALAGVPA VIKAAKHKL QLESRDH      V+ ++     L   PEP  + A  +L+ I
Sbjct: 781 ALAGVPANVIKAAKHKLLQLESRDH-----GVDMSKQQALPLTMTPEP--SAAELRLEAI 833

Query: 841 NPDNLTPKQALDLLYELKRL 860
           +P++L+P+QAL+LL+ELKRL
Sbjct: 834 DPNDLSPRQALELLFELKRL 853