Pairwise Alignments

Query, 861 a.a., DNA mismatch repair protein MutS (RefSeq) from Shewanella sp. ANA-3

Subject, 910 a.a., DNA mismatch repair protein MutS (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  575 bits (1482), Expect = e-168
 Identities = 349/889 (39%), Positives = 510/889 (57%), Gaps = 46/889 (5%)

Query: 15  MMRQYLTMKAEHHDMLLFYRMGDFYELFYDDAKRASELLGISLTARGKSGGDPIPMAGIP 74
           M  QYL +K ++ D LL YRMGDFYE+F+DDA+ A+  L I+LT R  +    +PM G+P
Sbjct: 1   MFEQYLRIKDDYPDALLLYRMGDFYEMFFDDAETAARELQIALTCRNPNADLRVPMCGVP 60

Query: 75  YHAVEGYLAKLVQIGQSVAICEQIGDPATSKGPVERKVVRIVTPGTLTDEALLQERQDNL 134
           +H+VEGY+ +L++ G  VA+C+QI DP  +KG V+R V R++TPGT+ ++A L  +  N 
Sbjct: 61  HHSVEGYITQLLEKGFKVALCDQIEDPREAKGLVKRAVTRVLTPGTVVEDANLDAKGHNY 120

Query: 135 LAAVY--QGKVGFGYATLDVSSGRFVIAELETKESLEAELQRTNPVEILYSEDF---GAM 189
           L A++  + K   G+A LD S+G +     +    L   +++  P E+L +E      +M
Sbjct: 121 LGALFWDEEKEAGGFAWLDFSTGEWSGLHAKKAADLWQWVRKMQPRELLVTESAQVPSSM 180

Query: 190 ELLHH--FKGKRRRPEWEFDYDTSIKLLLAQFGTKDLHGFGITDARLSLQAAGCLMQYVK 247
            L      +   R P   FD   + + LL   G +D    G+      +++ G L+ YV 
Sbjct: 181 SLTSTQVVRVPGRAP---FDLKAATERLLHAQGVRDTGALGLEGKDELVRSCGALLAYVV 237

Query: 248 DTQRTALPHINAITRFNQTDTIVLDAATRRNLELTQNLSGGRD-NTLAAVLDNTATAMGS 306
            TQ+  + H+      N    +++D  T RNLE+ + L G +   TL  VLD+T T MG 
Sbjct: 238 QTQKQDIIHLAPFRPLNLGRHLIVDEVTERNLEIFRRLDGRKGPGTLWHVLDHTQTPMGG 297

Query: 307 RMLQRWIHQPLRDHAQIFARQTAVNELLETT-AHESLHDQLKALGDIERIMARLALRTAR 365
           R+L+  +  P R+   I   Q AV+ L E       L   L  + D+ER+  R+ L  A 
Sbjct: 298 RLLEERLRHPWREMGPIEETQAAVSWLFERDDTRRDLRAGLDEVYDLERLTTRIFLNRAA 357

Query: 366 PRDFARLRQALNLLPQLQQSLAQLSAPHT--VKLGQLLGE---------------FPEEQ 408
           P+D+  LRQ+L  LP+++  L +   PH      G+  G+                 +  
Sbjct: 358 PKDYVALRQSLAALPKVRGVLERTETPHGGYPTDGEARGDGRPPFLRAALKGWDDLSDYF 417

Query: 409 QLLERAIVDNPPMLIRDGGVIREGYNAELDEWRGLSEGATDYLVQLEAREKERTGIATLK 468
            LLERA+VD+PP L+ +GG+ R G++AELDE   L+E   + L QL A E+  +G+  LK
Sbjct: 418 DLLERALVDSPPHLVTEGGLFRPGFHAELDELLDLTEHGENMLQQLLAEEQAASGLPRLK 477

Query: 469 VGYNRVHGYYIEVSRLQSQQVPLNYQRRQTLKNMERYITPELKEYEEKVLSSQGKALALE 528
           +G+NRV GYY E+SR  S  VP ++ RRQTL N ER+ TP LKE EEK++S+  +  +LE
Sbjct: 478 LGFNRVFGYYFELSRTASDAVPEHFVRRQTLANAERFTTPRLKELEEKLVSASDRRKSLE 537

Query: 529 KQLWDELFDLILPKLHELQAFARAAAELDVLSNFAERAETLGYTCPELSSEIGVKIEAGR 588
            +L+ +L + +      +   A   A  D   + AE A    +T P L+ +  + I  GR
Sbjct: 538 YKLFQKLRETVSEARPRVLFMADLLAGFDYWQSLAETARRWNWTRPVLAQDADILIREGR 597

Query: 589 HPVVERVSQTP-FIANPVTLHNQRRMLIVTGPNMGGKSTYMRQVALITLMAHIGCFVPAD 647
           HPVVE +  +  FI N + +   RR+L++TGPNM GKST +RQ A+I L+A +G FVPA 
Sbjct: 598 HPVVEAMQGSANFIPNDLRMDEARRLLLITGPNMAGKSTVLRQTAIICLLAQMGSFVPAR 657

Query: 648 RAIIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLVLMDEIGRGTSTYD 707
            A +G  DR+F+R+GASD+LA G+STFMVEM ETA IL  A  +SLV++DEIGRGTST+D
Sbjct: 658 EARLGIADRVFSRVGASDNLAQGQSTFMVEMMETARILRQAGKRSLVILDEIGRGTSTFD 717

Query: 708 GLSLAWSAAEYLAQQVGA--MTLFATHYFELTQLPELMAGVYNVHLDAIEHEDTIAFMHA 765
           GL+LAW+  E LA++ G    TLFATHY ELT L   + GV+N+++   E    I F+  
Sbjct: 718 GLALAWAVVEELARRAGGTIRTLFATHYHELTALEGRIPGVHNMNIAIREWGGEIVFLRR 777

Query: 766 VQEGAASKSYGLQVAALAGVPARVIKAAKHKLHQLE-SRDHQVEGANV------------ 812
           +  G + +SYG++VA LAGVP  V++ A+  LH+LE +RD + E                
Sbjct: 778 LVPGPSDRSYGIEVARLAGVPQPVVQRARELLHELEKARDGRGEAPRTARAVLPGLDMPE 837

Query: 813 -NGTRAPIQTLLALPEPVENPAVSKLKDINPDNLTPKQALDLLYELKRL 860
                 P   L A  EPV +P ++ L+D++ D+LTP  AL LL E K L
Sbjct: 838 PKQAAKPRALLAARAEPVAHPLLTTLRDLDTDHLTPMGALQLLNEWKLL 886