Pairwise Alignments

Query, 861 a.a., DNA mismatch repair protein MutS (RefSeq) from Shewanella sp. ANA-3

Subject, 903 a.a., DNA mismatch repair protein MutS from Caulobacter crescentus NA1000

 Score =  513 bits (1322), Expect = e-149
 Identities = 338/889 (38%), Positives = 487/889 (54%), Gaps = 48/889 (5%)

Query: 13  TPMMRQYLTMKAEHHDMLLFYRMGDFYELFYDDAKRASELLGISLTARGKSGGDPIPMAG 72
           TP+M Q+  MKA   D L+F+RMGDFYELF+DDA +A+  LGIS T RG   G PIPMAG
Sbjct: 19  TPVMAQFFEMKARQPDALIFFRMGDFYELFFDDAYKAAAALGISQTFRGTHNGQPIPMAG 78

Query: 73  IPYHAVEGYLAKLVQIGQSVAICEQIGDPAT-----SKGPVERKVVRIVTPGTLTDEALL 127
           +P HA E YL+KL+++G  VA+CEQ+ DPA      SK  V R +VR+VTPGTLT++ LL
Sbjct: 79  VPQHAAEAYLSKLIRLGFKVAVCEQMEDPAEAKKRGSKAVVRRDIVRVVTPGTLTEDGLL 138

Query: 128 QERQDNLLAAVYQGKVGFGYATLDVSSGRFVIAELETKESLEAELQRTNPVEILYSE--- 184
             R  N LAAV         A++++S+G   +  +  KE +   L    P E L ++   
Sbjct: 139 DARGANRLAAVALRAGQAAVASVELSTGEVEVLAV-AKEGVAPILAALAPSETLVADRLL 197

Query: 185 -DFGAMELLHHFKGK-RRRPEWEFDYDTSIKLLLAQFGTKDLHGFG-ITDARLSLQAAGC 241
            D    + L    G  +  P    +   S   +   +G + L GFG ++ A +   A G 
Sbjct: 198 SDDSLSQTLRICGGLVQPMPSALSEPQASETRVKRLYGVETLDGFGGLSPAEIG--ALGL 255

Query: 242 LMQYVKDTQRTALPHINAITRFNQTDTIVLDAATRRNLELTQNLSGGRDNTLAAVLDNTA 301
           +  +++ TQ   LP + A  R    D + +D ATR +LE+ +  SG R+ +L A +D T 
Sbjct: 256 IAAHLEMTQAGRLPALRAPRRAADADVMAIDPATRSSLEIDRTQSGDRNGSLLAAIDRTV 315

Query: 302 TAMGSRMLQRWIHQPLRDHAQIFARQTAVNELLE-TTAHESLHDQLKALGDIERIMARLA 360
           TA G+RML   + +PL D A I  R  AV   +E     + L + LK  GD+ R ++RLA
Sbjct: 316 TAGGARMLASRLARPLLDVAAIDQRLDAVEWFVEHRQLRQRLREVLKGAGDMARALSRLA 375

Query: 361 LRTARPRDFARLRQALNLLPQLQQSLA----QLSAP-----HTVK-----LGQLLGEFPE 406
           L    PRD   +R  L +  +L          LS P     H  K     L + L +F  
Sbjct: 376 LGRGGPRDLGCIRDTLKVGERLAGMAGGAPDPLSPPPFELEHAFKALTPALHEGLSQF-- 433

Query: 407 EQQLLERAIVDNPPMLIRDGGVIREGYNAELDEWRGLSEGATDYLVQLEAREKERTGIAT 466
               LE  +  + P L RDGG +  G   ELD+ RGL + +   +  LE++    +G+  
Sbjct: 434 -LTTLEHGLGPDLPALARDGGFVAAGVRPELDQARGLRDDSRKVIAALESQLALESGVP- 491

Query: 467 LKVGYNRVHGYYIEVSRLQSQ---QVPLN--YQRRQTLKNMERYITPELKEYEEKVLSSQ 521
           LK+ +N V GY++E +  ++    Q PLN  +  RQTL N  R+ T EL + + ++  + 
Sbjct: 492 LKIRHNGVLGYFVEATAGKADPLFQPPLNATFIHRQTLANQVRFTTVELADLDARIAQAA 551

Query: 522 GKALALEKQLWDELFDLILPKLHELQAFARAAAELDVLSNFAERAETLGYTCPELSSEIG 581
            +ALA+E   +++  +        +Q  + A A +DV S+ AE AE  G   P + +   
Sbjct: 552 ERALAMEVAAFEDWREQARLLADAIQIASEALARIDVASSLAEWAEDAGAVRPVVDASYA 611

Query: 582 VKIEAGRHPVVERVSQT---PFIANPVTL----HNQRRMLIVTGPNMGGKSTYMRQVALI 634
              +A RHPVVE   +    P+  N   L        R+ IVTGPNM GKST++RQ AL+
Sbjct: 612 FDAKAARHPVVEAAVKRAGEPYTPNDCRLDASGETAARLSIVTGPNMAGKSTFLRQNALL 671

Query: 635 TLMAHIGCFVPADRAIIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLV 694
            ++A  GC+VPA    +G +DR+F+R+GA DDLA GRSTFM+EM ETA+IL  A  +SLV
Sbjct: 672 AILAQSGCYVPAASFRLGVVDRLFSRVGAGDDLARGRSTFMMEMVETASILTQAGPRSLV 731

Query: 695 LMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYFELTQLPELMAGVYNVHLDAI 754
           ++DEIGRGT+TYDGL++AW+ AE L        LFATHY EL  L   MA V N+ L A 
Sbjct: 732 ILDEIGRGTATYDGLAIAWACAEALHDTNRCRALFATHYHELATLETRMAFVSNLSLRAK 791

Query: 755 EHEDTIAFMHAVQEGAASKSYGLQVAALAGVPARVIKAAKHKLHQLESRDH---QVEGAN 811
           E    + F+H    G A +SYG+QVA LAGVPA V+  A+  L +LES+D    +++   
Sbjct: 792 EWNGDLVFLHEAAPGPADRSYGVQVAKLAGVPAPVVVRAREVLDRLESKDQSPAKLDDLP 851

Query: 812 VNGTRAPIQTLLALPEPVENPAVSKLKDINPDNLTPKQALDLLYELKRL 860
           +      +    A  +   +   + L D++ D ++P++AL+ LY LK L
Sbjct: 852 LFAVSQAVAVTSAPAKAAPSAVETSLADLDVDGMSPREALEALYRLKGL 900