Pairwise Alignments

Query, 526 a.a., peptide chain release factor 3 (RefSeq) from Shewanella sp. ANA-3

Subject, 524 a.a., peptide chain release factor 3 from Sphingomonas koreensis DSMZ 15582

 Score =  489 bits (1258), Expect = e-142
 Identities = 256/530 (48%), Positives = 347/530 (65%), Gaps = 12/530 (2%)

Query: 1   MSDNKVEVDKRRTFAIISHPDAGKTTITEKVLLFGNALQKAGTVKGKKSGQHAKSDWMEM 60
           M DN +    RRTFAIISHPDAGKTT+TEK+LLFG A+  AG VK +   + A+SDWM++
Sbjct: 1   MPDNPIP--GRRTFAIISHPDAGKTTLTEKLLLFGGAIHLAGEVKARGQARRARSDWMKI 58

Query: 61  EKDRGISITTSVMQFPYGGALVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDSAKGVEDR 120
           E+ RGIS+T+SVM F   G   NLLDTPGHEDFSEDTYRTLTAVDS +MVID AKG+E +
Sbjct: 59  EQQRGISVTSSVMTFERDGVTFNLLDTPGHEDFSEDTYRTLTAVDSAVMVIDVAKGIESQ 118

Query: 121 TIKLMEVTRLRDTPIVTFMNKLDRDIRDPIELMDEVEDVLNIACAPITWPIGSGKEFKGV 180
           T KL EV RLR+ PI+TF+NK+DR+ R+  E +DE+ D+L +  AP+TWP+G G  F+GV
Sbjct: 119 TRKLFEVCRLRNVPIITFVNKVDREGREVFETLDEIADLLALDVAPMTWPVGMGGTFEGV 178

Query: 181 YHILRDEVVLYQSG----MGHTIQERRVIEGIDNPELDKAIGSY-AADLRDEMELVRGAS 235
           Y ++ + ++L +       G  IQ      G+D+P+LD  +     A LR++ EL     
Sbjct: 179 YDLVSNRLLLPEGDSREFQGKVIQTT----GLDDPQLDAIVSPQNLAKLREDAELAMAGY 234

Query: 236 NEFDHQAFLKGELTPVFFGTALGNFGVDHILDGIVEWAPKPLPRESDARMIMPDEEKFTG 295
             FD +A+  G+LTPV+FG+AL  FGVD ++D I   AP P    ++   + PD  + TG
Sbjct: 235 ASFDGEAYRNGDLTPVYFGSALKEFGVDSLIDAIARHAPPPHALPAEPAPVSPDNNEVTG 294

Query: 296 FVFKIQANMDPKHRDRVAFMRVCSGRYEQGMKMHHVRIGKDVNVSDALTFMAGDRERAEV 355
           FVFK+QANMDP HRDR+AFMR+ SG +++GMK+     GK + +   + F A  RE A+ 
Sbjct: 295 FVFKVQANMDPNHRDRIAFMRLVSGTFKRGMKLTPTGHGKPIAIHSPIMFFAQQRELADE 354

Query: 356 AYPGDIIGLHNHGTIRIGDTFTQGEKFRFTGVPNFAPEMFRRIRLRDPLKQKQLLKGLVQ 415
           A PGDIIG+ NHGT+R+GDT ++    RFTG+PNFAPE+ RR+ L+DP K KQL K L  
Sbjct: 355 ALPGDIIGIPNHGTLRVGDTLSEKAAVRFTGLPNFAPEILRRVVLKDPTKTKQLRKALDD 414

Query: 416 LSEEGAVQVFRPLDSNDLIVGAVGVLQFEVVVGRLKSEYNVEAIYEGISVSTARWVYCKD 475
           LSEEG +QVF P   ++ I+G VG LQ +V++ RL +EY V A  E     TARW+   +
Sbjct: 415 LSEEGVIQVFYPEIGSNWIIGVVGQLQLDVLLSRLDAEYKVGANLEPAPFDTARWI-GGE 473

Query: 476 ERKLEEFRRKCSQNLALDGGDNLTYIAPTMVNLNLSMERYPDIEFAKTRE 525
              ++EF       +A D   N  ++A +   +    +RY  ++F  TRE
Sbjct: 474 AADVKEFMDLNRGAMAKDRDGNPVFLAKSAWEVGYVADRYSRVKFMATRE 523