Pairwise Alignments

Query, 674 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella sp. ANA-3

Subject, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  357 bits (916), Expect = e-102
 Identities = 231/687 (33%), Positives = 366/687 (53%), Gaps = 36/687 (5%)

Query: 5   KSRRFYSAFF--AIAIFIVEIAL--------VVSTKQQLTTTQQE-----LLDSVEQPAA 49
           K R+ +S  F  A ++F+V + L         +S   Q  +  QE     L+ S E  A+
Sbjct: 3   KFRKIHSLAFKQAKSVFLVSVLLGLCFSFYHTLSDLHQEQSKVQEHYNFKLVQSYEN-AS 61

Query: 50  NAVWALDDNLARQTLEGAIKVEHVGSAVIELDDGSMFVSVSNNKKNNSQTFISLSNKLFD 109
            A + L++ LA Q     +    +    I  D G +           SQ    L++ L  
Sbjct: 62  QAAYHLNNLLAEQVATTLMLDPGIFKVEIVDDFGDVMTRKEKAISEQSQLVSVLASYLTP 121

Query: 110 DLKEISRPLYRPFYFEGTQKQQLIGTLTIFYDTQELTNTLFSQLRFSFFATLARALLLTL 169
            +   S  L++P          ++G L+ + D   +     ++        L R  LLT 
Sbjct: 122 AVSVFSAELHQP------NSNVVVGKLSFYIDGSSIAKVFIAKTTRVLLFDLLRNTLLTT 175

Query: 170 VLSVVFHRFLTQPIARISEAIDKISPDSPDENLLPMSNAHKDDELGLVTSKFNQILIQFS 229
           +L + F++ L++PI  +   ++ ++      + LP+   H DDEL  + S F  +     
Sbjct: 176 ILLLFFYQKLSRPITMLITWVNSLN--DTQRSPLPLRLTH-DDELSELASTFQSMWKGKE 232

Query: 230 QTQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKSSFALMFIDLDRFKNINDSLG 289
             +SKL ++A  D LTGL NR+LLL+ ++  I+ ++   S+  L ++DLDRFK INDSLG
Sbjct: 233 LAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLG 292

Query: 290 HALGDQFLARIARILERVVGDKGSVSRLGGDEFVILADSVHSPDQAADFVDKLLVQLNVP 349
           H +GDQ +  +A  +E    +    +R+GGDEF +L   + SP +A +   +LL  ++ P
Sbjct: 293 HTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYL-SPAKAEEVAKQLLTLISNP 351

Query: 350 IQLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSNQWAFFKQQMTERAA 409
             +++H  +   SIGIS++P  G+   D++R AD A+Y AKA+G N++ F++ +M  +  
Sbjct: 352 YAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVE 411

Query: 410 VRLRTEASLHDALKNNEFLLYFQPKLDLQTGKITACEALIRWQKDGR-LISPISFIPVAE 468
             L  E  LH+AL   +  L++QP++D Q   I   EALIRW    R L+ P  F+P+AE
Sbjct: 412 SFLEIEKGLHEALNQRQLELFYQPQVDEQ-HNIIGVEALIRWNHPKRGLLPPGVFMPIAE 470

Query: 469 ETGIIIPIGRWVIEQSCRVLRDWQKKYNYAIP----IAINVASQQFADASLVSDIKQMAL 524
           ETG I+PIG W+IEQ+C     W KK     P    +AIN++  QFA  S +  +     
Sbjct: 471 ETGQILPIGNWIIEQACYQYAQW-KKQGILPPHFRRLAINISPLQFAQESFIEQVNHALR 529

Query: 525 RYQIQPELLEIEITETSLMNDIELAINKLEQLKSAGFGIAVDDFGTGYSSLSYLRHLPIT 584
           +  I  E +E+EITE+ L+ ++E AI K+ +LK +   I++DDFGTGYSSL YL+HL + 
Sbjct: 530 QAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVD 589

Query: 585 TMKIDRCFVSDL---PGDSAIASTILMLGKQLNLTIVAEGIENEQQLDWLKRNQCQIGQG 641
            +KIDR FV+ L     D AI  TIL + ++LNL ++AEG+E+  +L  LK+  C   QG
Sbjct: 590 VLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQG 649

Query: 642 FYFSQPLPQAEFEALYIANQTATISNI 668
           + F +PL   E    +++N    I  +
Sbjct: 650 YLFDKPLRAEEIAQRFVSNSYRKIQTL 676