Pairwise Alignments

Query, 317 a.a., tRNA pseudouridine synthase B (RefSeq) from Shewanella sp. ANA-3

Subject, 315 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  500 bits (1288), Expect = e-146
 Identities = 251/312 (80%), Positives = 279/312 (89%)

Query: 1   MARRSKGRFIDGIVLLDKATGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE 60
           MARR+KGR IDGIVLLDK TGMSSN ALQRVKR +NA+KAGHTGALDPLATGMLPVCLGE
Sbjct: 1   MARRTKGRNIDGIVLLDKPTGMSSNHALQRVKRIYNASKAGHTGALDPLATGMLPVCLGE 60

Query: 61  ATKFSQHLLDSDKRYLVTAKLGQRTDTSDSDGEVVQTRPLEFTEAQLMSALEHFRGDTQQ 120
           ATKFSQHLLD+DKRYLVTAKLGQRTDTSDSDGEVV  RPL FT+  L +AL+ FRGDT Q
Sbjct: 61  ATKFSQHLLDADKRYLVTAKLGQRTDTSDSDGEVVSERPLNFTQEALDAALDSFRGDTLQ 120

Query: 121 VPSMYSALKYQGQPLYKYAREGIEVPREARPITVFELNFIGLEGDELTLDIHCSKGTYIR 180
           VPSM+SALKYQGQPLYKYAREG EVPREARPITVFELNFI LEGDELTLDIHCSKGTYIR
Sbjct: 121 VPSMFSALKYQGQPLYKYAREGKEVPREARPITVFELNFIKLEGDELTLDIHCSKGTYIR 180

Query: 181 TIIDDLGEMLGCGAHVIMLRRTQVAHYPYDKMVTLEQLEALVAKAQEEQLDPSSLLDSLL 240
           TIIDDLGE LGCGAHVIMLRRT VA YPY++MVT+E LEAL+ +A++E ++P +LLD LL
Sbjct: 181 TIIDDLGEKLGCGAHVIMLRRTAVAGYPYERMVTIEALEALLEQAEKEGVEPKTLLDPLL 240

Query: 241 LPMDTAVADFPEVNVPDASAAYLMQGQAVRVSGLVADTLVRITLGTERRFVGIGEMNQDG 300
           LPMDTAVA+FPEVN+PDA A YLM G  VRV+G+ +D+L+RITLG  RRFVG+G +N DG
Sbjct: 241 LPMDTAVANFPEVNIPDAVAPYLMNGNPVRVAGVSSDSLLRITLGEARRFVGVGAINDDG 300

Query: 301 LLAPKRLVVLHD 312
           LLAPKRLVV +D
Sbjct: 301 LLAPKRLVVFYD 312