Pairwise Alignments

Query, 317 a.a., tRNA pseudouridine synthase B (RefSeq) from Shewanella sp. ANA-3

Subject, 308 a.a., tRNA pseudouridine synthase B (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  149 bits (377), Expect = 6e-41
 Identities = 92/260 (35%), Positives = 140/260 (53%), Gaps = 14/260 (5%)

Query: 12  GIVLLDKATGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGEATKFSQHLL-D 70
           G+++L+K  G +S   + RVKR     K GH G LDP+A G+L V LG ATK S HL+ D
Sbjct: 10  GLLVLNKPQGPTSAQCIARVKRL-GQKKIGHAGTLDPMARGVLLVLLGHATKISGHLMAD 68

Query: 71  SDKRYLVTAKLGQRTDTSDSDGEVVQTRPLEF-TEAQLMSALEHFRGDTQQVPSMYSALK 129
            +K YL T +LG  TDT D++G V  T P +  T   +   +E++ G T+Q    YSA K
Sbjct: 69  GEKVYLGTLRLGTTTDTWDAEGSVTATAPYDHVTPDDIRREVENWLGSTEQEVPPYSAAK 128

Query: 130 YQGQPLYKYAREGIEVPREARPITVFELNFIGLEGDELTLDIHCSKGTYIRTIIDDLGEM 189
           +QGQPLYK +R G E P + + + +     +  +    T  + CS GTYIR++   LG  
Sbjct: 129 HQGQPLYKLSRAGRETPVKTKTVEISRAQVVSCDLPSATFRVTCSSGTYIRSLAHSLGMR 188

Query: 190 LGCGAHVIMLRRTQVAHYPYDKMVTLEQLEALVAKAQEEQLDPSSLLDSLLLPMDTAVAD 249
           LGCGA +  L R     +  D+     +L+A++A+ +         L   ++P+  A+  
Sbjct: 189 LGCGAMLTELTREYSHPFGIDE---AHELDAVLAEPER--------LPERVIPVTRALPH 237

Query: 250 FPEVNVPDASAAYLMQGQAV 269
           +P++ +  A  A +  G  V
Sbjct: 238 WPKLRISAAQEAGVRNGMIV 257