Pairwise Alignments

Query, 317 a.a., tRNA pseudouridine synthase B (RefSeq) from Shewanella sp. ANA-3

Subject, 318 a.a., tRNA pseudouridine(55) synthase TruB from Ralstonia sp. UNC404CL21Col

 Score =  239 bits (610), Expect = 6e-68
 Identities = 143/315 (45%), Positives = 191/315 (60%), Gaps = 23/315 (7%)

Query: 8   RFIDGIVLLDKATGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGEATKFSQH 67
           R + G++LLDK  G SSN AL RVKR   A KAGHTG LDPLATG+LP+C GEATKFSQ 
Sbjct: 15  REVHGVLLLDKPIGWSSNDALIRVKRLLWAKKAGHTGTLDPLATGLLPLCFGEATKFSQD 74

Query: 68  LLDSDKRYLVTAKLGQRTDTSDSDGEVVQTRPLEFTEAQLMSALEHFRGDTQQVPSMYSA 127
           LLD+DK Y    +LG +T T+D++GEV+  RP+  T  QL + +  F G+  QVP M+SA
Sbjct: 75  LLDADKTYETIVRLGIKTSTADAEGEVLSERPVSVTPEQLQAVIARFVGEIDQVPPMHSA 134

Query: 128 LKYQGQPLYKYAREGIEVPREARPITVFELNFIG--LEGDE--LTLDIHCSKGTYIRTII 183
           LK  G+PLY+YAR G  V R AR +T+  ++ +G  LE  E  +TL + CSKGTYIRT+ 
Sbjct: 135 LKKDGKPLYEYARAGQTVERAARRVTIHSIDVLGTDLESAEPTITLRVSCSKGTYIRTLG 194

Query: 184 DDLGEMLGCGAHVIMLRRTQVAHYPYDKMVTLEQLEALVAKAQEEQLDPSSLLDSLLLPM 243
           +D+GE LGCG H++ LRRTQV +      VTLE L+A    A+ E          LL P+
Sbjct: 195 EDIGEALGCGGHLVALRRTQVGNLTLSGAVTLEALDAAAEDARTE----------LLAPV 244

Query: 244 DTAVADFPEVNVPDASAAYLMQGQ--AVRVSGLVADTL----VRITLGTE--RRFVGIGE 295
           D  +   P V +    +   + GQ   +R++   AD +    VR  +  E     +G+  
Sbjct: 245 DALLQTLPRVELDAEESRRFLHGQRLPLRLALPNADQVRVYGVRDAIAAEATASLLGVAA 304

Query: 296 MNQDGLLAPKRLVVL 310
             Q G+L P+RLV L
Sbjct: 305 W-QGGVLRPERLVHL 318