Pairwise Alignments

Query, 1074 a.a., carbamoyl phosphate synthase large subunit (RefSeq) from Shewanella sp. ANA-3

Subject, 1082 a.a., Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) from Rhodospirillum rubrum S1H

 Score = 1304 bits (3374), Expect = 0.0
 Identities = 670/1067 (62%), Positives = 817/1067 (76%), Gaps = 15/1067 (1%)

Query: 1    MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60
            MPKRTDIKSILI+GAGPIVIGQACEFDYSGAQACKALR EGYRVILVNSNPATIMTDPE 
Sbjct: 1    MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALRAEGYRVILVNSNPATIMTDPET 60

Query: 61   ADATYIEPIQWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLAEFNVEMIGATA 120
            ADATYIEPI  E+V  II +ERPDA+LPTMGGQTALN A+ L  +GVL ++ VEMI A  
Sbjct: 61   ADATYIEPITPEIVEAIIERERPDALLPTMGGQTALNTAMALADRGVLTKYGVEMIAANK 120

Query: 121  DAIDKAEDRSRFDKAMKSIGLECPRAGIAHSMEEAYGVLDLVGFPCIIRPSFTMGGSGGG 180
            + I KAEDR  F  AM+ IGL+CPR+ + HS+EE+   L+ +G P IIRPSFT+GG GGG
Sbjct: 121  EVIAKAEDRLLFRDAMRKIGLDCPRSALVHSIEESRQALEEIGLPVIIRPSFTLGGQGGG 180

Query: 181  IAYNKEEFEEICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDPM 240
            +A+N+EE++ I + GL  SP +++L++ES++GWKEYEMEVVRDR DNCIIVCSIEN DPM
Sbjct: 181  MAFNREEYDRIVASGLAASPVRQILVEESVLGWKEYEMEVVRDRADNCIIVCSIENIDPM 240

Query: 241  GVHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEM 300
            GVHTGDSITVAPA TLTDKEYQ+MRNAS+A LREIGVETGGSNVQF +NPKDGR+V+IEM
Sbjct: 241  GVHTGDSITVAPALTLTDKEYQVMRNASIACLREIGVETGGSNVQFAVNPKDGRLVVIEM 300

Query: 301  NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVP 360
            NPRVSRSSALASKATGFPIAKIAAKLAVG+TLDEL NDIT G TPASFEP IDYVVTK+P
Sbjct: 301  NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDIT-GVTPASFEPTIDYVVTKLP 359

Query: 361  RFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVSRHGFDPITDLTKA-- 418
            RF FEKF  +   L++ MKSVGE MAIGRTF+ESLQK LR LE+   G D +     A  
Sbjct: 360  RFTFEKFPDTEALLSSSMKSVGEAMAIGRTFKESLQKGLRSLEIGLDGLDEVEIPGSAGQ 419

Query: 419  DALARIRLELKEPGCDRIWYIADAMRAGLTLDEIFRLTNIDPWFLVQIEELIKLEGQVAE 478
            D    IR  L +   DRI  IA A+R G T++E+  +   DPWFL QI+E++  E ++ E
Sbjct: 420  DGKDAIRAALSKARPDRILIIAQALRQGFTVEEVRAICYYDPWFLEQIKEIVDEERRLRE 479

Query: 479  GGLAGLNEELLRKLKRKGFADARLAAVLGVNETEVRKLRDRFDIHPVYKRVDTCAAEFAT 538
             GL G +   L ++K+ GF+DARLA + G   TEV   R   ++HPVYKR+DTCAAEFA+
Sbjct: 480  NGLPG-DAVSLHRVKKMGFSDARLAKLTGKTVTEVSFRRQVLNVHPVYKRIDTCAAEFAS 538

Query: 539  DTAYMYSTYE------EECEANPSDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 592
             T YMYS YE       ECEA  SDR KI++LGGGPNRIGQGIEFDYCCVHAA AL + G
Sbjct: 539  RTPYMYSCYEGDGLTPAECEAEVSDRTKIIILGGGPNRIGQGIEFDYCCVHAAYALSDAG 598

Query: 593  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGV----IVQYGGQTPLK 648
            +ETIMVNCNPETVSTDYDTSDRLYFEP+T+EDV+E+ R E+ +G     IVQYGGQTPLK
Sbjct: 599  FETIMVNCNPETVSTDYDTSDRLYFEPLTIEDVVELARKEQARGTLLGCIVQYGGQTPLK 658

Query: 649  LARALEAAGVPIIGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIG 708
            LAR LEAAG+P++GTSPDAID AEDR+RFQ+ I +L ++QP N T  +VE A   A R+G
Sbjct: 659  LARGLEAAGIPVLGTSPDAIDLAEDRDRFQKLIAKLALRQPRNGTALSVEQARAIATRVG 718

Query: 709  YPLVVRPSYVLGGRAMEIVYDQQDLLRYFNEAVSVSNASPVLLDHFLDDAIEVDIDAVCD 768
            YP+V+RPSYVLGGRAM+IV+D+  L  Y   AV VS   PVL+D++L  AIEVD+DA+ D
Sbjct: 719  YPVVIRPSYVLGGRAMQIVHDEAQLNDYMVNAVKVSGDDPVLIDNYLSGAIEVDVDAIAD 778

Query: 769  GETVVIGAIMEHIEQAGVHSGDSGCSLPPYTLSQAIQDEMRVQVRKLAMELGVVGLMNVQ 828
            GET  I  IM+HIE+AG+HSGDS CSLPPY+L +A   E+  Q   LA  L V GLMN+Q
Sbjct: 779  GETTHIAGIMQHIEEAGIHSGDSACSLPPYSLDEATIAELTKQTEALAKGLNVRGLMNIQ 838

Query: 829  FAVKNNEIYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKAQNFTQEVIPPFYS 888
            FA+K+ +IY++EVNPRA+RTVPFV+KATGV +AKIAARVMAG+SL +     + +    +
Sbjct: 839  FAIKDGDIYILEVNPRASRTVPFVAKATGVAVAKIAARVMAGESLASFGLVTKRL-AHVA 897

Query: 889  VKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALLSV 948
            VKE V PF +FPGVD +LGPEM+STGEVMG+  TFA A+AK+QLGA   +P+ G A +SV
Sbjct: 898  VKEAVFPFARFPGVDIVLGPEMKSTGEVMGIDTTFARAFAKSQLGAGVTLPEGGTAFISV 957

Query: 949  RNSDKKRVADLAAKLIELGYQIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNGE 1008
            R+ DK  +  +A +L ELG+++ AT GTA +L E G++  ++NKV EGRPH +D + +G+
Sbjct: 958  RDGDKAAIMPIARELTELGFRLVATRGTAALLAENGLSVEVINKVLEGRPHCVDAMISGD 1017

Query: 1009 YTYIVNTTEGRQAIEDSRQLRRGALRYKVNYTTTMNAAFATCMAHAA 1055
               + NTTEG Q+ +DS  +R  AL   + + TT+  A A   A  A
Sbjct: 1018 IHLVFNTTEGIQSQKDSFDIRHTALMRNIPHYTTVAGATAAVKAMTA 1064