Pairwise Alignments

Query, 1074 a.a., carbamoyl phosphate synthase large subunit (RefSeq) from Shewanella sp. ANA-3

Subject, 1078 a.a., carbamoyl-phosphate synthase, large subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 1241 bits (3212), Expect = 0.0
 Identities = 637/1077 (59%), Positives = 801/1077 (74%), Gaps = 11/1077 (1%)

Query: 1    MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60
            MPKRTD+K I+++G+GPIVIGQACEFDYSG QA KAL+EEGY V+LVNSNPATIMTDP +
Sbjct: 1    MPKRTDLKRIMVIGSGPIVIGQACEFDYSGTQAVKALKEEGYEVVLVNSNPATIMTDPGL 60

Query: 61   ADATYIEPIQWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLAEFNVEMIGATA 120
            AD TYIEPI+ E V  II KERPDA+LPT+GGQT LN AL L A GVL E  V++IGA  
Sbjct: 61   ADRTYIEPIEPETVAAIIRKERPDALLPTLGGQTGLNTALALAAMGVLEECGVDLIGANK 120

Query: 121  DAIDKAEDRSRFDKAMKSIGLECPRAGIAHSMEEAYGVLDLVGFPCIIRPSFTMGGSGGG 180
              I+KAE R  F +AM +IGL+ P +GIA +ME+   +   + FP IIRP+FTMGG+GGG
Sbjct: 121  QVIEKAESRELFREAMANIGLKVPASGIARTMEDVRRLGTEMPFPLIIRPAFTMGGTGGG 180

Query: 181  IAYNKEEFEEICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDPM 240
            IAYN E+ EEI ++GL  S   E++I++S++GWKE+EMEV+RD+ DNC+I+CSIENFDPM
Sbjct: 181  IAYNMEDLEEIAARGLAASIKHEVMIEQSVLGWKEFEMEVMRDKADNCVIICSIENFDPM 240

Query: 241  GVHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEM 300
            GVHTGDSITVAPAQTLTD EYQ+MR+AS+A++REIGVETGGSNVQFGINP++G MV+IEM
Sbjct: 241  GVHTGDSITVAPAQTLTDVEYQMMRDASIAIMREIGVETGGSNVQFGINPQNGDMVVIEM 300

Query: 301  NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVP 360
            NPRVSRSSALASKATGFPIAKIAAKLAVG+TLDE+ NDIT   T ASFEP+IDY VTK+P
Sbjct: 301  NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDIT-RETMASFEPSIDYCVTKIP 359

Query: 361  RFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVSRHGFDPITDLTKADA 420
            RF FEKF G+ D LTT MKSVGE M+IGRTF+ESLQK LR LEV   G        K   
Sbjct: 360  RFTFEKFPGAKDELTTSMKSVGEAMSIGRTFKESLQKGLRSLEVGAPGLGS-AFRCKGPE 418

Query: 421  LARIRLELKEPGCDRIWYIADAMRAGLTLDEIFRLTNIDPWFLVQIEELIKLEGQVAEGG 480
               I  +L+ P   RI+Y+  AM  G+T++EI   T IDPWFL Q+++L+ +E ++ +  
Sbjct: 419  REDIMRKLRTPNSRRIFYVRHAMLDGMTVEEIHEATAIDPWFLRQMKDLVDMEAELRDFA 478

Query: 481  LAGL----NEE---LLRKLKRKGFADARLAAVLGVNETEVRKLRDRFDIHPVYKRVDTCA 533
            L       N E   L+R+ K  GF+D +LA +    E++VR LR +  I P Y  VDTCA
Sbjct: 479  LGNAMTVDNAELVALMRRAKEYGFSDRQLAEMWKRPESDVRTLRKQMGIAPTYYLVDTCA 538

Query: 534  AEFATDTAYMYSTYEEECEANPSDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGY 593
            +EF   T Y YSTYE   E    DR+K+++LGGGPNRIGQGIEFDYCC HA+ AL+E G 
Sbjct: 539  SEFEAYTPYYYSTYETGHEVAVEDRKKVIILGGGPNRIGQGIEFDYCCCHASFALKEMGV 598

Query: 594  ETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARAL 653
            + IMVN NPETVSTDYDTSDRLYFEP+T EDV+ I+  EKP GV+VQ+GGQTPL LA  L
Sbjct: 599  QAIMVNSNPETVSTDYDTSDRLYFEPLTFEDVMNIIETEKPDGVVVQFGGQTPLNLAVPL 658

Query: 654  EAAGVPIIGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIGYPLVV 713
              AGVPI+GTSPD+IDRAEDRERFQ  +Q+L ++QP N TV ++  A  AA RIGYP VV
Sbjct: 659  MRAGVPILGTSPDSIDRAEDRERFQALLQKLGLRQPANATVMSLPEARSAAARIGYPTVV 718

Query: 714  RPSYVLGGRAMEIVYDQQDLLRYFNEAVSVSNASPVLLDHFLDDAIEVDIDAVCDGETVV 773
            RPSYVLGGRAMEIVYD++ L  YF  +V      P+L+D FL+ AIEVD+DA+ DG  V 
Sbjct: 719  RPSYVLGGRAMEIVYDEEQLAEYFANSVGEKPKHPILIDKFLESAIEVDVDALSDGTDVY 778

Query: 774  IGAIMEHIEQAGVHSGDSGCSLPPYTLSQAIQDEMRVQVRKLAMELGVVGLMNVQFAVKN 833
            +  IMEHIE+AG+HSGDS C +PP+TL +AI +E+  Q  +LA EL VVGLMN+QFAVK+
Sbjct: 779  VAGIMEHIEEAGIHSGDSACVIPPHTLPEAIVNEIARQTVELARELRVVGLMNIQFAVKD 838

Query: 834  NEIYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKAQNFTQEVIPPFYSVKEVV 893
              IY++EVNPRA+RT PFVSKAT VPL ++A ++M G +LK  +        ++SVKE V
Sbjct: 839  GLIYILEVNPRASRTAPFVSKATAVPLPRLATQIMLGATLKELDPWSMRRTGYFSVKESV 898

Query: 894  LPFNKFPGVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALLSVRNSDK 953
             PFN+FPGVD LLGPEMRSTGEVMG+  +F EAY K QL     +P+SG+  +SV + DK
Sbjct: 899  FPFNRFPGVDILLGPEMRSTGEVMGIASSFEEAYLKGQLAGGQRLPQSGKIFISVNDRDK 958

Query: 954  KRVADLAAKLIELGYQIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNGEYTYIV 1013
              + ++A+   +LG+++ AT GTA +L E G+    V+KV+EGRP+I+D IKNG+   ++
Sbjct: 959  LLITEVASMFADLGFEVLATSGTAKLLREGGVPATSVHKVYEGRPNIVDFIKNGDIALVL 1018

Query: 1014 NTTEGRQAIEDSRQLRRGALRYKVNYTTTMNAAFATCMAHAADD--RTNVTSVQELH 1068
            NT  G++ ++DS+ +R+  L Y V Y+TT++ A A   A  A      NV S+QE +
Sbjct: 1019 NTASGKRTVQDSKSIRQATLMYGVPYSTTVSGAKAIAQAIRASRCCGVNVKSLQEYY 1075