Pairwise Alignments

Query, 386 a.a., carbamoyl phosphate synthase small subunit (RefSeq) from Shewanella sp. ANA-3

Subject, 387 a.a., carbamoyl-phosphate synthase small chain from Phaeobacter inhibens DSM 17395

 Score =  377 bits (967), Expect = e-109
 Identities = 199/373 (53%), Positives = 251/373 (67%), Gaps = 7/373 (1%)

Query: 8   SALLVLEDGTVFTGTAIGADGLSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 67
           +A L L DGT+F G   GA G +V E+ FNT+MTGYQEI+TDPSY+ QIVT T+PHIGNT
Sbjct: 10  TACLALADGTIFYGNGFGAYGETVAELCFNTAMTGYQEIMTDPSYAGQIVTFTFPHIGNT 69

Query: 68  GTNNEDVESNGVHACGLIIRDLPLVASSFRNQQTLSDYLKANNVVGIADIDTRKLTRILR 127
           G   ED E+    A G++++  P +AS++R  + L D+L   N + I  IDTR+LTR +R
Sbjct: 70  GVTPEDDETADPVAAGMVVKWDPTLASNWRATEELKDWLTRTNRIAIGGIDTRRLTRAIR 129

Query: 128 EKGAQAGCIMAGAD--LDEAKALAAAKAFPGLKGMDLAKEVTTDKAYPWRKGSWRLVGGL 185
           + GA    +    D   D    +A A+ + GL+G+DLAK+VT  ++Y W +  W    G 
Sbjct: 130 QLGAPHVALAHDPDGNFDIEALVAKAREWSGLEGLDLAKDVTCSQSYRWDEMRWAWPEGY 189

Query: 186 PEDTPAEALKYKVVAYDYGVKQNILRMLVDRGCDVTVVPAKTSAADVLAMNPDGVFLSNG 245
              T  EA K+KVVA DYG K+NILR L   GCDVTV+PA  +A +VLA +PDGVFLSNG
Sbjct: 190 ---TRQEAPKHKVVAIDYGAKRNILRCLASAGCDVTVLPASATAEEVLAHSPDGVFLSNG 246

Query: 246 PGDPEPC-DYAIEAIQQILKT-DTPIFGICLGHQLLALASGAKTLKMKFGHHGANHPVSN 303
           PGDP    +YA+  IQQIL T D P+FGICLGHQ+LALA G KT+KM  GHHGANHPV  
Sbjct: 247 PGDPAATGEYAVPMIQQILDTTDLPMFGICLGHQMLALALGGKTVKMNHGHHGANHPVKE 306

Query: 304 IEKGNVMITSQNHGFAADEATLPANIKVTHKSLFDGSLQGIHLTDKPAFSFQGHPEASPG 363
              G V ITS NHGFA D  +LP  ++ TH SLFDGS  GI ++D+P +S Q HPEASPG
Sbjct: 307 NATGKVEITSMNHGFAVDGQSLPDGVEETHVSLFDGSNCGIRISDRPVYSVQHHPEASPG 366

Query: 364 PNDAAPLFDHFIE 376
           P D+  LF+ F E
Sbjct: 367 PQDSFYLFERFAE 379