Pairwise Alignments

Query, 359 a.a., DNA polymerase IV (RefSeq) from Shewanella sp. ANA-3

Subject, 354 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Pseudomonas stutzeri RCH2

 Score =  336 bits (862), Expect = 5e-97
 Identities = 176/339 (51%), Positives = 242/339 (71%), Gaps = 1/339 (0%)

Query: 1   MRKIIHIDMDCYFAAVEMRDFPEYRGKPLAVGGSRVQRGVISTCNYEARKFGVRSAMATG 60
           +RKIIHID DC++AA+EMRD P    +P+AVGG+  +RGVI+TCNYEAR +GVRSAMA+G
Sbjct: 6   LRKIIHIDCDCFYAAIEMRDDPSLARRPIAVGGAADRRGVIATCNYEARAYGVRSAMASG 65

Query: 61  YALKLCPDLILVPGRMQVYKEVSQQIRAIFCRYTELIEPLSLDEAYLDVSDCKLFKGSAT 120
           +ALKLCPDL+++  RM+ Y+E S++I+ IF  YTELIEPLSLDEAYLDV+ C+ F GSAT
Sbjct: 66  HALKLCPDLLILRPRMEAYREASREIQNIFRTYTELIEPLSLDEAYLDVTACEHFSGSAT 125

Query: 121 LIAEAIRRDILAETGLTASAGVAPIKFLAKVASDLNKPNGQCVIPPDEVAEFVKSLSLRK 180
            IAE IRR +  +  +T SAGVAP KFLAK+AS+ NKP+G  VI P +V EFV+ L +++
Sbjct: 126 RIAEDIRRRVWQQLRITVSAGVAPNKFLAKIASEWNKPDGLFVITPAQVDEFVQELEVKR 185

Query: 181 IPGVGKVTAEKLSSLGLNTCADVQAYPKQELIARFGKFGTVLVERAHGIDERGISVSRER 240
           + GVG+VTAEKL+ LG++TC D++ + +  L+  FG FG  L   A GIDER + V   R
Sbjct: 186 LHGVGRVTAEKLARLGIHTCNDLREWGRLALVREFGAFGERLWGLARGIDERPVQVENRR 245

Query: 241 KSVGVETTLAQDIYTLEQCQQVMPGLIQELSSRLGRSAKGRQIHKQVVKLKFNDFKQTTI 300
           +SV VE T  +D+  L  C + +P L+Q+L++R+ R     +  K  VKLKF+DF QTT+
Sbjct: 246 QSVSVEQTYDRDLPDLAACLERLPELLQQLATRMARLDGSYRPGKPFVKLKFHDFTQTTL 305

Query: 301 EHRSDEVSVVMFYELLSQAMARQEGRGIRLLGVSVGLAE 339
           E     + +  + +LL+ A +R   R +RL+GV V L +
Sbjct: 306 EQAGAGLELDDYSDLLAIAFSR-GARPVRLIGVGVRLID 343