Pairwise Alignments

Query, 359 a.a., DNA polymerase IV (RefSeq) from Shewanella sp. ANA-3

Subject, 351 a.a., DNA polymerase IV from Pantoea sp. MT58

 Score =  378 bits (970), Expect = e-109
 Identities = 203/345 (58%), Positives = 250/345 (72%), Gaps = 11/345 (3%)

Query: 1   MRKIIHIDMDCYFAAVEMRDFPEYRGKPLAVGGSRVQRGVISTCNYEARKFGVRSAMATG 60
           MRKIIH+DMDC++AAVEMRD P+ R  P+A+GGSR +RGVIST NY ARK+GVRSAM TG
Sbjct: 1   MRKIIHVDMDCFYAAVEMRDNPQLRDIPIAIGGSRERRGVISTANYPARKYGVRSAMPTG 60

Query: 61  YALKLCPDLILVPGRMQVYKEVSQQIRAIFCRYTELIEPLSLDEAYLDVSDCKLFKGSAT 120
            ALKLCP L L+PGR   YKE S QIR IF RYT LIEPLSLDEAYLDV+D     GSAT
Sbjct: 61  MALKLCPHLRLLPGRFDAYKEASAQIRDIFTRYTPLIEPLSLDEAYLDVTDSPHCHGSAT 120

Query: 121 LIAEAIRRDILAETGLTASAGVAPIKFLAKVASDLNKPNGQCVIPPDEVAEFVKSLSLRK 180
           L+A+AIR  I  ETGLTASAG+APIKFLAK+ASDLNKP+GQ VI P E+A F+ +L L K
Sbjct: 121 LMAQAIRATIYRETGLTASAGIAPIKFLAKIASDLNKPDGQFVITPPEMAGFLLTLPLAK 180

Query: 181 IPGVGKVTAEKLSSLGLNTCADVQAYPKQELIARFGKFGTVLVERAHGIDERGISVSRER 240
           IPGVGKV+A+KL  +GL TC DVQ      L+ RFGKFG VL ER++GID+R + V RER
Sbjct: 181 IPGVGKVSAKKLEEMGLVTCGDVQKADLALLLKRFGKFGRVLWERSNGIDDRSVIVERER 240

Query: 241 KSVGVETTLAQDIYTLEQCQQVMPGLIQELSSRLGRSAKGRQIHKQVVKLKFNDFKQTTI 300
           KS+GVE TLA+DI   + C +++  L  EL  RL +    RQ+ +Q VKLKF+DF+QTT 
Sbjct: 241 KSLGVERTLAEDISDWDACLEIIDFLYAELDRRLTQIRPDRQVARQGVKLKFSDFQQTTQ 300

Query: 301 EH------RSDEVSVVMFYELLSQAMARQEGRGIRLLGVSVGLAE 339
           EH      + D +++            R+ GRG+RL+G+ V + +
Sbjct: 301 EHIWPVLNKEDMIAIAR-----KTWDERRAGRGVRLVGLHVTMVD 340