Pairwise Alignments

Query, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 626 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N1B4

 Score =  264 bits (675), Expect = 8e-75
 Identities = 185/657 (28%), Positives = 321/657 (48%), Gaps = 40/657 (6%)

Query: 14  VTIVGALAVLLTLVAALLVN--KESNNTRKQVDADISALVALKANEIGGYFVAKGQVIHS 71
           + +  AL V +  V  +L N  ++    R   ++ +  L +L  + I  +  ++ Q++ S
Sbjct: 7   ILLAAALVVAVAFVCFILFNDYRQRQTLRSSTESSMQELGSLTTSNIQTWLESRIQLLQS 66

Query: 72  VFAEPGLINWFSQYHARGSNLANDQQYQDIIRYFRSFSDRDTDVKSVFFGSANTFEYFDL 131
           +           Q    GS LAN ++  D+  Y  +F       +  +FG  +   +   
Sbjct: 67  LS---------QQIAVDGSALANLKRAIDLPAYTSNF-------QLSYFGGTDGVMFSVP 110

Query: 132 NGRFDGDPNYYTNKRPWWQEAIDQRGLFVGDPAVDANDGSISATVKTPVYGANGELIGIG 191
            G    D  Y    R W++ A + +   V +P + A+ G +  TV TPV   N ++IG+ 
Sbjct: 111 AGNRAAD--YDPRARGWYKAANNAQQTIVTEPYIAASSGKLVITVATPVKHQN-QMIGVA 167

Query: 192 GMDILIDTIGKTLLAPIKYRNYGQAFLMTDEGKLVYFPGFSDKFPPGSLANQIDSQFKDT 251
           G DI + ++   ++  + +  +G AF+++ +GK++  P               DS+    
Sbjct: 168 GADIDLSSVS-AIINSLNFGGHGHAFIVSADGKILIHP---------------DSKLVLK 211

Query: 252 SGFTALRQQMQREAQGFAEVTFNGVPQRVTFVSVGGDYPKQKWHLAFMLPHEVIEAPVTE 311
           +   A      + + G  EV  +G  Q ++F  V G  P   W++A +L  +   + ++E
Sbjct: 212 NLADAYSNGAPKISPGLKEVELDGKTQFISFTHVNG-VPSADWYVALVLDKDTAFSMLSE 270

Query: 312 AFWNACFVALGIMLLVGITVWLMLLPFRRQ-LSKLLDAMEDIAEGDSDLSQRILMEREDE 370
            F  +  +A+ I +++ I +  ML+    Q L  +  AM DIAEG+ DL++R+ +  +DE
Sbjct: 271 -FRTSAIIAMIIAVVIIIALLSMLIRVLMQPLLTMGRAMHDIAEGEGDLTKRLTIHGQDE 329

Query: 371 LGKLGDAFNRFAEKVQQMLLHTRNLTQEVGTGVMDARQVCDLAVSSVSSQKQQIDSVATA 430
            G LG +FNRF E++   +    + T +V    +      + ++ +   Q  +  SVA A
Sbjct: 330 FGALGTSFNRFVERIHTSIREVSSATGQVNEVALRVVAASNSSMFNSDQQASRTSSVAAA 389

Query: 431 ATQMAQTSQEMAISAQRANDFAEKAQTQAHDGTQIVSRATEGMKALSVQVIEAAKVIKEL 490
             ++   +QE+A +A  A+  +  A+  A DG Q+V +    M+ LS ++ ++   I+ L
Sbjct: 390 INELGAAAQEIAQNAALASQHSSDARALAEDGQQVVDKTIAAMQQLSAKISDSCGNIETL 449

Query: 491 RSSSEQIGEVLSVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQDST 550
            S++  IG++L VI +I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQDS 
Sbjct: 450 NSNTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQDSA 509

Query: 551 ANIQGIIQTLQQSALQAEQVMESGVEQARVGQDLTTQVEQALSDIASAIVSIQQQTVEIT 610
             +Q +I+ LQ  A +A   M     Q+     +  Q  + L  +   I  I      + 
Sbjct: 510 QQVQKMIEELQVGAREAVSTMTDSQRQSESSVGIANQAGERLGSVTQRIGEIDGMNQSVA 569

Query: 611 VAIGQQAVVAEEVAQNVVSVRGLSDQSLLSSQDLSQSLQGFEQATHELTRNIGQFKI 667
            A  +Q  V E +  ++  +  L+ + + + Q   ++    EQ    L + +G F+I
Sbjct: 570 TATEEQTAVVESINVDITEINTLNQEGVENLQSTLRACADLEQQAARLKQLVGSFRI 626