Pairwise Alignments

Query, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 526 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  207 bits (526), Expect = 1e-57
 Identities = 121/311 (38%), Positives = 182/311 (58%)

Query: 355 GDSDLSQRILMEREDELGKLGDAFNRFAEKVQQMLLHTRNLTQEVGTGVMDARQVCDLAV 414
           GD+ +SQ I   R DE+G++  A      +   M+    + ++++     D       + 
Sbjct: 210 GDNPVSQLIYTGRRDEIGQIEFAMKMLETEAGAMVGRIADSSRQLSDHARDLLGAMHGST 269

Query: 415 SSVSSQKQQIDSVATAATQMAQTSQEMAISAQRANDFAEKAQTQAHDGTQIVSRATEGMK 474
            S + Q+Q+ D +ATA  QM+ + QE+A++AQR  + A +A ++A  G ++V R    + 
Sbjct: 270 QSAARQQQETDLIATAIQQMSASVQEVALNAQRTAEVAARADSEAAKGREVVGRTGSSIT 329

Query: 475 ALSVQVIEAAKVIKELRSSSEQIGEVLSVIRNIADQTNLLALNAAIEAARAGEQGRGFAV 534
            L+  + +AA+VI +L + S++I  VL VI  IA+QTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 330 RLAADIQQAAEVIHQLENHSQEISRVLDVIHGIAEQTNLLALNAAIEAARAGEQGRGFAV 389

Query: 535 VADEVRTLASRTQDSTANIQGIIQTLQQSALQAEQVMESGVEQARVGQDLTTQVEQALSD 594
           VADEVR LASRT  +T +IQ +I +LQ  A +A  VM+   EQA        Q E +LS 
Sbjct: 390 VADEVRQLASRTSLATTDIQRMIGSLQTGAREAVDVMQRSREQAEHSVSHADQAEHSLSG 449

Query: 595 IASAIVSIQQQTVEITVAIGQQAVVAEEVAQNVVSVRGLSDQSLLSSQDLSQSLQGFEQA 654
           I S +  I   + +I  A+ QQ+ V EE++Q++VS+RG SD+ + S     ++  G    
Sbjct: 450 INSRVNEISAMSSQIAAAVDQQSSVGEEISQSIVSIRGSSDEHVASGLHSQRNATGVALL 509

Query: 655 THELTRNIGQF 665
              +   + QF
Sbjct: 510 ADGMLELVQQF 520