Pairwise Alignments

Query, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  243 bits (619), Expect = 3e-68
 Identities = 156/533 (29%), Positives = 273/533 (51%), Gaps = 20/533 (3%)

Query: 136 DGDPNYYTNKRPWWQEAIDQRGLFVGDPAVDANDGSISATVKTPVYGANGELIGIGGMDI 195
           D   +Y    RPW+ +A+      + +P +DA    +  T+ TP+ G +G + G+ G D+
Sbjct: 116 DMSADYDPRTRPWYVDALRAGKTILTEPYLDAVTKGLVVTLATPIKGDSG-VSGVIGGDL 174

Query: 196 LIDTIGKTLLAPIKYRNYGQAFLMTDEGKLVYFPGFSDKFPPGSLANQIDSQFKDTSGFT 255
            ++ + K +++ ++    G AFL+   G+++  P               D+     +   
Sbjct: 175 SLEILVK-MISSLRMHGDGYAFLVDANGRILVHP---------------DTSLVMKTLAE 218

Query: 256 ALRQQMQREAQGFAEVTFNGVPQRVTFVSVGGDYPKQKWHLAFMLPHEVIEAPVTEAFWN 315
                  R +Q  +E  + G  Q +TF  V G  P   W++   +  ++  A + E F N
Sbjct: 219 VYPANTPRLSQDLSESEYAGKTQILTFAHVDG-LPSVNWYVGVAMDKDIAYAALGE-FRN 276

Query: 316 ACFVALGI-MLLVGITVWLMLLPFRRQLSKLLDAMEDIAEGDSDLSQRILMEREDELGKL 374
           +  VA  I ++L+ + + ++L    R L+ +  AM DIA G+ DL++R+++E +DE G L
Sbjct: 277 SAIVATVIAVVLIILLLGMLLSVLLRPLNLMGRAMHDIAAGEGDLTKRLVIESQDEFGHL 336

Query: 375 GDAFNRFAEKVQQMLLHTRNLTQEVGTGVMDARQVCDLAVSSVSSQKQQIDSVATAATQM 434
           G+ FN F E++   +    + T ++    +      + ++ +   Q  + +SVA A  ++
Sbjct: 337 GNGFNLFVERIHDSMREVASSTVQLNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINEL 396

Query: 435 AQTSQEMAISAQRANDFAEKAQTQAHDGTQIVSRATEGMKALSVQVIEAAKVIKELRSSS 494
              +QE+A +A RA+  +  A+T A DG  +V +  E M  LS ++  A+  I+ L + +
Sbjct: 397 GAATQEIAQNAARASGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTKT 456

Query: 495 EQIGEVLSVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQDSTANIQ 554
             IG++L VI  I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ+S + +Q
Sbjct: 457 ANIGQILDVITGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAHRTQESASQVQ 516

Query: 555 GIIQTLQQSALQAEQVMESGVEQARVGQDLTTQVEQALSDIASAIVSIQQQTVEITVAIG 614
            +I+ LQ  A +A  +M     ++     +  +   +L  +   I  I      +  A  
Sbjct: 517 EMIEQLQSGAREAVSIMNDSQRESVETVGIANKAVASLEHVTERIGEIDGMNQSVAAATE 576

Query: 615 QQAVVAEEVAQNVVSVRGLSDQSLLSSQDLSQSLQGFEQATHELTRNIGQFKI 667
           +Q  V E +  ++  +  L+ Q + +     ++    EQ +  LT+ +G F+I
Sbjct: 577 EQTAVVEAINVDITEINTLNQQGVENLNATLRACTDLEQQSTRLTQLVGSFRI 629