Pairwise Alignments

Query, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  250 bits (638), Expect = 2e-70
 Identities = 182/670 (27%), Positives = 316/670 (47%), Gaps = 50/670 (7%)

Query: 6   RSLSLQLVVTIVGALAVLLTLVAALLVN--KESNNTRKQVDADISALVALKANEIGGYFV 63
           +SL     + +  AL V++     ++VN  ++  + +  V +++  L  L    I  +  
Sbjct: 2   KSLGFSKKILLAAALIVVVAFSVFIVVNDYRQRQSLKSSVKSELQQLGTLTTQNIQTWLE 61

Query: 64  AKGQVIHSVFAEPGLINWFSQYHARGSNLANDQQYQDIIRYFRSFSDRDTDVKSVFFGSA 123
           ++ Q++ S+           Q  A G  L   Q+   +  Y  SF       +  +FGS 
Sbjct: 62  SRMQLLQSMS---------QQIAADGKELPQLQRAIGLPAYSESF-------QLSYFGST 105

Query: 124 N--TFEYFDLNGRFDGDPNYYTNKRPWWQEAIDQRGLFVGDPAVDANDGSISATVKTPVY 181
               F     N   D DP      R W++ A +  G  V +P + A+ G +  T+ TPV 
Sbjct: 106 EGVMFSVPSANRPADYDPR----ARGWYKAAQNAPGTIVTEPYIAASSGKLVMTMATPVK 161

Query: 182 GANGELIGIGGMDILIDTIGKTLLAPIKYRNYGQAFLMTDEGKLVYFPGFSDKFPPGSLA 241
             N + +G+ G DI +D + K ++  + +  +G AFL++ +GK++  P            
Sbjct: 162 FQN-QFVGVAGADIALDNVTK-IINSLNFDGHGYAFLVSADGKILVHP------------ 207

Query: 242 NQIDSQFKDTSGFTALRQQMQREAQGFAEVTFNGVPQRVTFVSVGGDYPKQKWHLAFMLP 301
              DS+    +   A      +   G  E+     P+ ++F  V G      W++A +L 
Sbjct: 208 ---DSKLVLKNISEAYPTNTPKITTGVTEIDSGKNPEIISFTPVQG-VSTANWYVALVLE 263

Query: 302 HEVIEAPVTE----AFWNACFVALGIMLLVGITVWLMLLPFRRQLSKLLDAMEDIAEGDS 357
            +   A + E    A      V + I+LL+G+ + +++ P    L ++  AM DIA+G+ 
Sbjct: 264 QDSAYAMLAEFRASAITAMVVVVVVIILLLGLLIRVLMQP----LHQMGRAMRDIADGEG 319

Query: 358 DLSQRILMEREDELGKLGDAFNRFAEKVQQMLLHTRNLTQEVGTGVMDARQVCDLAVSSV 417
           DL++R+ +  +DE G+L ++FNRF E++   +    +   ++G       +V + ++ + 
Sbjct: 320 DLTKRLAITSQDEFGELAESFNRFVERIHTSIREVASTAAQLGEVATRVVKVSNASMGNS 379

Query: 418 SSQKQQIDSVATAATQMAQTSQEMAISAQRANDFAEKAQTQAHDGTQIVSRATEGMKALS 477
             Q  + +SVA A  ++   +QE+A +A R +  +  A   A DG  +V +  + M  LS
Sbjct: 380 DQQANRTESVAAAINELGAAAQEIAQNAARTSQQSSDASGLASDGQNVVQQTIKAMNELS 439

Query: 478 VQVIEAAKVIKELRSSSEQIGEVLSVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVAD 537
            ++ E+   I+ L   +  IG++L VI +I+ QTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 440 GKISESCVNIESLNGKTANIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVAD 499

Query: 538 EVRTLASRTQDSTANIQGIIQTLQQSALQAEQVMESGVEQARVGQDLTTQVEQALSDIAS 597
           EVR LA RTQDS   +Q +I+ LQ  A  A   M     Q+     +     + L  +  
Sbjct: 500 EVRNLAHRTQDSAQQVQTMIEELQVGARDAVTNMTESQRQSEDSVGIANLAGERLGSVTR 559

Query: 598 AIVSIQQQTVEITVAIGQQAVVAEEVAQNVVSVRGLSDQSLLSSQDLSQSLQGFEQATHE 657
            I  I      +  A  +Q  V E +  ++  +  L+   + + +   ++    E+    
Sbjct: 560 RIEEINGMNQSVAAATEEQTSVVESINVDITHINTLNQLGVDNLRQTLEACNSLEEQAAR 619

Query: 658 LTRNIGQFKI 667
           L + +G F+I
Sbjct: 620 LQQLVGSFRI 629