Pairwise Alignments

Query, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 626 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  246 bits (628), Expect = 2e-69
 Identities = 167/572 (29%), Positives = 291/572 (50%), Gaps = 30/572 (5%)

Query: 107 SFSDRDTDVKSVFFGSA--NTFEYF---DLNGRFDGDPN------YYTNKRPWWQEAIDQ 155
           +F   ++D+  +   SA  +TF++    D  G F   PN      Y   +RPW++  +D 
Sbjct: 74  AFQGVNSDLSGLVSQSALVSTFQFTYVGDSKGTFTQRPNVDMPAGYDPRQRPWYKSTVDA 133

Query: 156 RGLFVGDPAVDANDGSISATVKTPVYGANGELIGIGGMDILIDTIGKTLLAPIKYRNYGQ 215
               +  P + A+ G +  T+ +PV  A G++ G+ G D+ +DT+ K ++  +++   G 
Sbjct: 134 GKTILSAPYL-ASVGGLVVTIASPVKAA-GQVTGVVGGDLSLDTLVK-IINSVEFGGLGY 190

Query: 216 AFLMTDEGKLVYFPGFSDKFPPGSLANQIDSQFKDTSGFTALRQQMQREAQGFAEVTFNG 275
           AFL++ +G+++  P   DK        Q+    KD        Q +  +A+   EVT NG
Sbjct: 191 AFLVSGDGQIIVSP---DK-------EQVMKNLKDIYP----GQTISLDAR-LREVTLNG 235

Query: 276 VPQRVTFVSVGGDYPKQKWHLAFMLPHEVIEAPVTEAFWNACFVALGIMLLVGITVWLML 335
             + ++F  + G  P   W++   +  +   AP+++   +A    L  + ++ + + L++
Sbjct: 236 QQRLLSFTPITG-LPSADWYIGLSIDKDKAYAPLSQFRSSAMVAVLIAVAVIALLLSLLI 294

Query: 336 LPFRRQLSKLLDAMEDIAEGDSDLSQRILMEREDELGKLGDAFNRFAEKVQQMLLHTRNL 395
               R L+ +  AM+DIA+G+ DL++R+ ++ +DE   LG +FN+F E+V   ++   + 
Sbjct: 295 RALMRPLTDMGRAMQDIAQGEGDLTRRLSIQGKDEFAALGGSFNQFVERVHASIVEVSSA 354

Query: 396 TQEVGTGVMDARQVCDLAVSSVSSQKQQIDSVATAATQMAQTSQEMAISAQRANDFAEKA 455
           T +V           + ++     Q  + ++VA A  ++   +QE+A +A  A+  A +A
Sbjct: 355 TLQVHDLSQRVVNSSNSSIVGFDEQSARTNNVAAAINELGAATQEIARNASDASIQASEA 414

Query: 456 QTQAHDGTQIVSRATEGMKALSVQVIEAAKVIKELRSSSEQIGEVLSVIRNIADQTNLLA 515
           + QA DG  +V +    M ALS ++ ++   I++L +S+E IG +L VI+ I+ QTNLLA
Sbjct: 415 RNQAEDGQVVVEKTIHAMSALSAKISDSCTQIEQLNASTENIGHILDVIKGISQQTNLLA 474

Query: 516 LNAAIEAARAGEQGRGFAVVADEVRTLASRTQDSTANIQGIIQTLQQSALQAEQVMESGV 575
           LNAAIEAARAGE GRGFAVVADEVR LA RTQ S   I  +I +LQ  +  A   M    
Sbjct: 475 LNAAIEAARAGEAGRGFAVVADEVRNLAHRTQTSADEIHKMIGSLQSGSQHAVLNMNESQ 534

Query: 576 EQARVGQDLTTQVEQALSDIASAIVSIQQQTVEITVAIGQQAVVAEEVAQNVVSVRGLSD 635
             ++   ++  Q    L D+   I  I      +  A  +Q  V E +  ++  +  L+ 
Sbjct: 535 TSSQESVEVANQAGSRLRDVTRRIGDIDGMNQSVAAATEEQTAVVETLNIDINQINTLNQ 594

Query: 636 QSLLSSQDLSQSLQGFEQATHELTRNIGQFKI 667
           Q + +  +  +      Q    L + +  FKI
Sbjct: 595 QGVANLNETLKDCAALSQQAGRLKQLVDSFKI 626