Pairwise Alignments

Query, 312 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

Subject, 308 a.a., multidrug ABC transporter ATP-binding protein from Burkholderia phytofirmans PsJN

 Score =  215 bits (548), Expect = 9e-61
 Identities = 131/311 (42%), Positives = 175/311 (56%), Gaps = 27/311 (8%)

Query: 13  LKKTYKGGVEAVKGISLTVEQGDFFALLGPNGAGKSTTIGIISSLVQKTAGSVQVFDFDI 72
           L KTY  G  A+K I+L + +G+ FALLGPNGAGK+T I II  +V  + GSV V   DI
Sbjct: 10  LSKTYATGFHALKNINLAINRGEIFALLGPNGAGKTTLISIICGIVNASTGSVTVDGRDI 69

Query: 73  DKQLEEAKLCIGLVPQEFNFNQFETVLQIVVNQAGYYGVPKHIALERAEKYLSQLDLWDK 132
                 A+  IGLVPQE   + FETV   V    G +G PK+ A    EK L  L LW+K
Sbjct: 70  ATDYRGARSLIGLVPQELTTDSFETVWATVSFSRGLFGKPKNPAY--VEKVLRDLSLWEK 127

Query: 133 RNSQSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWEFLKQINQQGVTI 192
           R+S+  TLSGGMKRR++IA+AL HEP++L LDEPTAGVD+ELRR MW+ ++ +   GVTI
Sbjct: 128 RDSKIITLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRRDMWKLVRSLAASGVTI 187

Query: 193 ILTTHYLEEAEMLCRNIGIIDKGVLVECTSMKALLSKLNLETFILDLRRDIDVAP-TLNG 251
           ILTTHY++EAE +   IG+I  G ++       L+ KL  +   L L   +   P +L G
Sbjct: 188 ILTTHYIDEAEEMADRIGVISAGEIMLVEEKTELMRKLGKKQLTLQLESPLAQVPASLAG 247

Query: 252 MVCRLTDPHTLEVDVAKDHN-----------LNDVFTQLTA---AKVEVLSMRNKSNRLE 297
                       +DVAK  N             D+   L A   A +    +    + LE
Sbjct: 248 ----------YGLDVAKGGNELIYTYEGEGGRTDIIALLKALDDAGIRFKDLHTTQSSLE 297

Query: 298 ELFVELVKKTQ 308
           ++FV L++  Q
Sbjct: 298 DIFVSLLRGNQ 308