Pairwise Alignments

Query, 646 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

Subject, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  117 bits (292), Expect = 1e-30
 Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 23/277 (8%)

Query: 375 AMNDLPSAYQTLQQFVALTRKVEDNSFAHQTTELKVKFDTS---WIESENKRLLDNQKLK 431
           ++ DL      +  F  +   V D+  + +T  L + F      W    +   +     K
Sbjct: 75  SLQDLAEDIIVITAFFHIHLPVPDSILSQETARLMLVFQQESKDWKIVHSGISIPYGIAK 134

Query: 432 EQEL----ALLEKNKSLQLIILLLTGCILAIVSLFAYKQVHRNRHLQTIALTDYLTQLPN 487
           + E+    +L E+N+ L+ II   T           Y+    N  L+ ++ TD LT + N
Sbjct: 135 KGEIYPMTSLEERNRELESIIQART-----------YELAEANNRLEKLSNTDGLTNIGN 183

Query: 488 RRYIYAKAEQYFQQALKQQTPLSVIIFDADHFKKINDNFGHEIGDQALLTIAQA-SQALT 546
           RR      ++ + +  +  TPLS+I+ D DHFK  ND++GH  GD  L  +A   SQ+  
Sbjct: 184 RRLFDQMLQKEWSRGQRNNTPLSLIMLDIDHFKLFNDHYGHLAGDDCLKMLANGLSQSGR 243

Query: 547 ADRNLIGRIGGEEFLILLPNTNAERVWELAHELQTLITRYGAINLPVELKL-TVSAGVAT 605
               L+ R GGEEF+ILLPNT+ +   + A  +  LI      ++   L + TVS GVA 
Sbjct: 244 RAGELVARYGGEEFVILLPNTDLQTALDTAKHVHQLIQSLAIPHIKTNLGIVTVSVGVAC 303

Query: 606 LNTELGKQDDSFARLLKRADNALYDAKNAGKNCVKVA 642
           L   L     +   L+ +AD ALY AK+AG+NC++ A
Sbjct: 304 L---LPSDKHNALELVHQADTALYLAKSAGRNCIRSA 337