Pairwise Alignments

Query, 646 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

Subject, 319 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  111 bits (277), Expect = 5e-29
 Identities = 66/173 (38%), Positives = 99/173 (57%), Gaps = 9/173 (5%)

Query: 472 HLQTIALTDYLTQLPNRRYIYAKAEQYFQQALKQQTPLSVIIFDADHFKKINDNFGHEIG 531
           +L   A+TD LT L NRR      + +  +A +Q T  S+++ D D FK  ND +GH++G
Sbjct: 151 NLSLAAMTDQLTSLHNRRAYEIAIQDHIHRAEEQHTRCSLLLIDIDRFKVFNDTYGHQVG 210

Query: 532 DQALLTIAQASQALTADRNLIGRIGGEEFLILLPNTNAERVWELAHELQTLIT-RYGAIN 590
           D+ L  +A A +      + + R GGEEF++LLPNT+     ++A  L+  I+ R  AI 
Sbjct: 211 DKVLAYVALALKQCVRGDDFVARYGGEEFVVLLPNTHFHDALQVAETLRGRISERRLAIG 270

Query: 591 LPVELKL---TVSAGVATLNTELGKQDDSFARLLKRADNALYDAKNAGKNCVK 640
              +L L   TVS G+A+L     ++ D    L  RAD ALY+AK+ G+NCV+
Sbjct: 271 KDKKLSLGAITVSIGLASL-----QKGDDAETLFSRADKALYEAKSDGRNCVR 318