Pairwise Alignments

Query, 646 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

Subject, 827 a.a., GAF domain/sensory box/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  111 bits (277), Expect = 1e-28
 Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 4/166 (2%)

Query: 477 ALTDYLTQLPNRRYIYAKAEQYFQQALKQQTPLSVIIFDADHFKKINDNFGHEIGDQALL 536
           A TD LT   NRR  +  A + F +AL+  + L+V++ D DHFK +ND +GH+ GD+ L 
Sbjct: 648 ATTDPLTGGRNRRQFFVDANREFARALRHDSGLAVLMLDIDHFKNVNDLYGHQAGDEVLR 707

Query: 537 TIAQASQALTADRNLIGRIGGEEFLILLPNTNAERVWELAHELQTLITRYGAINLPVELK 596
             A          ++ GR+GGEEF  LLP  + E   E A  L+  + R   +     L+
Sbjct: 708 AFAACCVEALRAYDVFGRLGGEEFAALLPAASPEEAMETAERLRKRVERRSVVYEGTALQ 767

Query: 597 LTVSAGVATLNTELGKQDDSFARLLKRADNALYDAKNAGKNCVKVA 642
            TVS GV    T L   D  F  +L+RAD ALY AK+ G+N  ++A
Sbjct: 768 CTVSVGV----TSLAAADLGFDDMLRRADRALYAAKDHGRNRSEMA 809